Gene Huta_2707 details

Gene Information

• Locus tag: Huta_2707
• ID: 8385012
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhabdus utahensis DSM 12940
• Kingdom: Archaea
• Replicon accession: NC_013158
• Strand: -
• Start bp: 2775870
• End bp: 2777744
• Gene Length: 1875 bp
• Protein Length: 624 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 644973781
• Product: glycoside hydrolase family 2 sugar binding
• Protein accession: YP_003131601
• Protein GI: 257053768
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG3250] Beta-galactosidase/beta-glucuronidase

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCGCGG CGGCCCCCGC CACACGTATG ATGAACGAGT GGCGGGCGGC GAGAGTCGAG 
CCGGGCGGCG ACCGGCCCGA TCCGGCGACC TGGGAGCCGG TCGAGGTGCC GGGGCGGCCG 
GCGGCATTTG CTGGCGCTGA CGCCGTGGCC TACCGATCGA CGTTCGCGGA TCCGACAGCG 
GAAGACGAAC ACGCGACGCT CGTCCTGGAA GGAGTCTACG CGCACGCTCG CGTCTGGCTC 
AACGACACGT TTCTGGGTGA ACACGACGCC TACTTCGAGC CGCTCCGACT CCGCCTCGAC 
GCCGCGCTCG CTGCCGAAAA CGAGCTGCTT GTCGAATGCC GACCGCCGGA GGACCGTTTC 
GGTGGGAGTT ACGAAACCGA CGAGGTCCCC GACGAACTCG CGGTCCCCGG TATCTGGTGG 
GATGTCGATG TCGAGACATA CACGGACCAC CACATCCTCG ATCTCTCGGC CCGCCCGCGG 
GTCGACGACG AGGATGCGCG CTTCGACGTC CGGGCGACCG TCCTCGCCGA GACAGCGCTC 
GACGATCGGC TGACGTTCTC CGTCAAGCCC GAGGGGTCAC GCCGTGGTCG GGGAATGATG 
GATCGCACGG CGATCGAGGC GGATGCCGGC GAACGGACGA CGGTCGAATA CACGATCGAT 
ATCCGGGATC CCGCCCTGTG GTGGCCCCAC GACCTCGGCG AGCAGAACCG CTACGTCATC 
CGGGCGAAGC TCGACGACGA CGAACGCACG CTGACCACGG GGCTGTGCTC GGTCGACGAC 
GACGAAAGCG ATGGGCTCCG GGTCAACGAC ACGCCGATGA CGGCCCGTGG CGTTGGTCTC 
CTCGCAGCCG AGCCAGAGGA CATCGAACGA GCGGTCGACC TCAACGCCAA CCTGGTCCGG 
GCACACGCTC ACGTCCCGTC GCCGGCCGTC TACGAGGCGG CCGACGAGGC CGGCGTCTTG 
GTCTGGCAGG ACCTCCCGCT GACCGGGCCG GGCCCGTTCG ACATCGAGCG TGGCCGGGAC 
CTGACCGGTC GACTCGTCTC AGCGTACGAA CATCACCCCG GCTTCGCCGC GATCAGCGTC 
CACGACGATC CGGTCACGGT GAGTGACGGA CCGCTCGGGT CCGGGTTCCT CGACCGGTTG 
CGTCTCCGGT GGCGGCGTTT TCGGGCGGAC TACGATCACG AACCCGCCGA AACCGTCGCC 
GCCGAGGTTC CCGACGGTAT CGTCACGCTG CCAGTCGTCG GGCCACCCGG GATCGAGCCG 
GACGCGACGT CGCTGTATCC CGGCTGGAGA TACGGCCAGG CGGTGGACGT CGATCAGCTA 
CTGGAGCGGA ATCCCTCGCT CGATTCCGTG GTTGGGGAGT ACGGTGCGGG ATCGCTGGGC 
GTCGAAGACC CCGTCGACGT CGACGGGTTC GATCGTGAGG TTCACGACTA TCACGTCTCC 
GGGGGCGTCG AGGACTCCCA GGCCTACCAG CGGTCCGTGA TCGCGACGGT CACCGAACGA 
CTTCGCCTGC GGGGGACGGA CGTACTCGTG GCTGGATCGC TCCGTGATCT TGGCGACGCC 
GGCATGGGCG TCCTGGCGCG CGACGGTACA CCCAAGGATG CACACGACGC ACTCGCCAGC 
GCCTTCGAGC CAGTGCAAGC GATGCTTGCC GATCCGCGTG CGGGTGGAGA ATCGGACGTC 
GTCGTCCACA ACGACCTGCC AACCGACGTC ACCGACCGCC TCACCTGGGA GGTTGGCGGT 
GAAACCGGAG AAGCCGACGT CGCCATCGGC GCTGCGAGCA GTGAGACAGT GACGTCGATC 
TCGATTCCGC AAGATGCCGA GACGATCACG CTGTCGCTGG CCGGCCACTC AGTCTCAAAC 
ACATATCAGT TATAA 

 

Protein sequence

MPAAAPATRM MNEWRAARVE PGGDRPDPAT WEPVEVPGRP AAFAGADAVA YRSTFADPTA 
EDEHATLVLE GVYAHARVWL NDTFLGEHDA YFEPLRLRLD AALAAENELL VECRPPEDRF 
GGSYETDEVP DELAVPGIWW DVDVETYTDH HILDLSARPR VDDEDARFDV RATVLAETAL 
DDRLTFSVKP EGSRRGRGMM DRTAIEADAG ERTTVEYTID IRDPALWWPH DLGEQNRYVI 
RAKLDDDERT LTTGLCSVDD DESDGLRVND TPMTARGVGL LAAEPEDIER AVDLNANLVR 
AHAHVPSPAV YEAADEAGVL VWQDLPLTGP GPFDIERGRD LTGRLVSAYE HHPGFAAISV 
HDDPVTVSDG PLGSGFLDRL RLRWRRFRAD YDHEPAETVA AEVPDGIVTL PVVGPPGIEP 
DATSLYPGWR YGQAVDVDQL LERNPSLDSV VGEYGAGSLG VEDPVDVDGF DREVHDYHVS 
GGVEDSQAYQ RSVIATVTER LRLRGTDVLV AGSLRDLGDA GMGVLARDGT PKDAHDALAS 
AFEPVQAMLA DPRAGGESDV VVHNDLPTDV TDRLTWEVGG ETGEADVAIG AASSETVTSI 
SIPQDAETIT LSLAGHSVSN TYQL