| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_2588 |
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| Symbol | |
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| ID | 8384893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | + |
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| Start bp | 2653807 |
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| End bp | 2656017 |
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| Gene Length | 2211 bp |
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| Protein Length | 736 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644973663 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_003131483 |
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| Protein GI | 257053650 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
[COG4608] ABC-type oligopeptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.104782 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTATTG ATAACGTGAC TGCGGAGTCT GATGAACAGC CACCCGAAGT CGAGCAAGTC
GAGAAGCCCG ACCCGATCAT GCGCCTCGAC GACGTTCGGG TCACCTTCGA GATGGATCGG
GGTATCTCGC GGGTCCTCGA CGACATCAAC ATGGACATCG GCCGCGGCGA GATCGTCGGC
ATCGTCGGCG AGAGCGGCGC GGGCAAGTCG ACACTCGTCT CGGCGATGAT GGACTCAGTC
GAGGAACCCG GCGTCCTCGA AGGGTCGATC GAGTATCGGC CCTCGGAGGG CGAGGCAGTC
GACATCCTCG AGTTCACCGA CGAACAGCTC CGGCAGTGGC GCTGGGAGGA AGTCGCGATG
GTCTTCCAGG GGGCGATGGC CTCGTTCAAC CCCGTCAAGC GGATCGAGGA TCACTTCGTC
GAGACGCTGA AGGCTCACGA CCACAACGTC AAAGAGGGAA TGCAGCGGGC CCGCGACCTC
ATCGCCGACC TCTACATGCA GCCCGACCGC GTGCTATCGG CCTTCCCCCA CGAACTTTCC
GGTGGGATGC GCCAGCGCAC GCTGCTTGCA CTGGCGATGG TGCTCGATCC CGAGATGTTG
ATCATGGACG AGCCGACCGC CGCGCTGGAC CTGCTGATGC AGCGGTCGAT CCTCCAGCTG
CTCCGGGACC TGCAGGAAGA ACACGACATC TCGATGGTGT TCATTACCCA CGACCTGGCG
CTGGTGGCCA GCCTGGCCGA CCGCCTGGCG GTGATGTACG CCTTCCGGAT GGTCGAGGTC
GGGCCCAAGG AGAAGATGCT CCGGGACCCC GGCCACCCCT ACACACGGAT GCTGTTGAAC
TCGACGCCGG ATATCGACGC CCCGATCGAT CAGAACCGTT CGATCGACGG GTCGAGTCCG
GACCCGCTGA ACGTGCCAGA AGGGTGTTCG TTCCATCCGC GGTGTCCGCT GGCCGAGGAG
GCCTGTCTCG AGAGCGAGCC CGATCAGTTC TTGCTCGATG ACGACCACGG GGCCGCGTGT
TTCCGCTGGG AGGAGGCCCA GACGTCGATG CCGCTGGTCT ACGAACAGGA GGTCGAGGAC
GTCGACAGTG AGGGAGCGGA AACCTCGACC AGCGCCAGAC GCTCACGGGA CGAAGAGCCG
TTGCTCTCCG TCAACGACCT CGAGGTCCAC TTCGAACAGT CACAGGGGAT CATCGAGTCG
CTGTTCGGCG ACGACCCGAA TGTCGTTCGT GCGGTCGACG GGATCAACCT CGACATCTAC
GAGAAGGACG TCGTCGCGCT GGTCGGCGAA TCCGGCTGCG GGAAGACGAC CCTCGGGAAG
ACGATCCTCG GACTCCAGGA GCCCACCAGC GGGTCCATCG AGTACCGTGG CGTCGACCTC
GTGGAGGCCA AGAAAGGCAA CGCCGAGATG TCCTGGGACG AGATCCGCAA ATCGTTGCAG
ATCATCCATC AGGATCCGGG GAGTTCGCTC AATCCCAACC GCCGGCTGAA GTCCATCCTG
TCAGTTCCAC TCAAGCAGAT CCACCCCGAG ATGAGTACCG GGGAGCGTCT CGACCGGATC
TACACGCTGA TGAACTACGT CGGCTTGACG CCGGCGACGG AGTACGGTGA ACGGTACCCC
CACCAGCTCA GCGGCGGAGA GAAACAGCGC GTCGCCCTGT GTCGGGCCCT GTTGATGAAC
CCGGATCTGA TTCTCGCCGA CGAGGCGATC AGCGCACTGG ACGTCTCCCT GCGCGTCGAG
ATGATGGATC TGATGCTCGA GCTCCAGGAG GAGTTCGACA CCTCGTTCCT GTTCATCTCC
CATGACCTCT CGAACGCCCG GTATCTCGCC CAGAAGTCCG GCGGCCGCAT CGCCGGGATG
TATCTGGGCG AGTTTGTCGA GATCGGACCT GCAGAGCAGA TCACCCGCAA TCCGTCCCAT
CCGTACACTG ACGTTCTGCG ATGGGGGACG CCGAATATCG ACCCGGAGAA AGCCCAGATC
GGGGAAATGC CGATGCGGAA GATCGACATT CCCGACCCGA TCAATCCGCC CTCTGGCTGT
CGGTTCCACA CGCGCTGTCC GGAGGCTCGC GAGGCCTGTA TCCAGGAGAA GCCTGCCGGC
CAGCAGATCG ACGCTGAGGG ATTCCACACC TCGAGTTGCT TCCGGGAGTA CGGTGAAGAC
CACCCCTACT GGGACAGCGA ACCGGTCACC GACGAGATGA TCGACGACTG A
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| Protein sequence | MSIDNVTAES DEQPPEVEQV EKPDPIMRLD DVRVTFEMDR GISRVLDDIN MDIGRGEIVG
IVGESGAGKS TLVSAMMDSV EEPGVLEGSI EYRPSEGEAV DILEFTDEQL RQWRWEEVAM
VFQGAMASFN PVKRIEDHFV ETLKAHDHNV KEGMQRARDL IADLYMQPDR VLSAFPHELS
GGMRQRTLLA LAMVLDPEML IMDEPTAALD LLMQRSILQL LRDLQEEHDI SMVFITHDLA
LVASLADRLA VMYAFRMVEV GPKEKMLRDP GHPYTRMLLN STPDIDAPID QNRSIDGSSP
DPLNVPEGCS FHPRCPLAEE ACLESEPDQF LLDDDHGAAC FRWEEAQTSM PLVYEQEVED
VDSEGAETST SARRSRDEEP LLSVNDLEVH FEQSQGIIES LFGDDPNVVR AVDGINLDIY
EKDVVALVGE SGCGKTTLGK TILGLQEPTS GSIEYRGVDL VEAKKGNAEM SWDEIRKSLQ
IIHQDPGSSL NPNRRLKSIL SVPLKQIHPE MSTGERLDRI YTLMNYVGLT PATEYGERYP
HQLSGGEKQR VALCRALLMN PDLILADEAI SALDVSLRVE MMDLMLELQE EFDTSFLFIS
HDLSNARYLA QKSGGRIAGM YLGEFVEIGP AEQITRNPSH PYTDVLRWGT PNIDPEKAQI
GEMPMRKIDI PDPINPPSGC RFHTRCPEAR EACIQEKPAG QQIDAEGFHT SSCFREYGED
HPYWDSEPVT DEMIDD
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