Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_2440 |
Symbol | |
ID | 8384742 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | - |
Start bp | 2510342 |
End bp | 2512879 |
Gene Length | 2538 bp |
Protein Length | 845 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644973516 |
Product | glycoside hydrolase family 2 sugar binding |
Protein accession | YP_003131339 |
Protein GI | 257053506 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.21652 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGAAAA AGTTCCTCAA CGGTCGCTGG GAGTTCCGCG ACCCGGACGG CGAGTGGCTC GATGGGACCG TTCCCGGCGG CGTCTACACG GACCTGCGGA CGAACGGTGT GATCGACGAT CCGTTCGTGG CCGACAACGA ACTCGACGTC CAGTGGGTCG GTCGGACCGA CTGGACCTAT CGCCGGACCG TCGATGTCGA GCCGGCAATG CTTGCTCACG ACCGCGTCCT GTTGGGCTGT GACGGACTGG ACACCGTCGC GACAGTCCGG GTGAACGGCG AGGTGGTCGG AGAGTCGGTC AACATGCACG TCGCCAACGA ATTCGACGTG GCCGACGCCC TCAAGCGCGG GGAAAACGAG ATCCGTATCG AGTTTCGGTC CCCCGTCGAG TACGCCCTCG AGCGACAGGA GGCCCATCCC CACGAGGTTC CCCACACCCA CTATCCAGTC GAGCAGCCCG GCCGACCGTT CATCCGGAAG GCCCAGTGTC ACTTCGGGTG GGACTGGGGC CCGAGTCTCC CGACGACGGG GATCTACCGG GACATCTCGC TTGTGGCCTA CTCCGCCCCG CGGATTACCC ATACGACGAC CGAACAGGAC CACGACGGCG AGCGCATCGA CCTGACTGTC CGGGTCGGGA TCGACGCGCC GAGTGCGGGC GAGTGCGAAC TCGCGGCGTC GGTCGCGGAC GGCGAAACGA CCGAGACGGT GGTACTGGGG GCGGGCGAGC AGGAAGTCGA ACTCACGCTC GGCGTCGAGG ACGTCGACCT GTGGTGGCCC AACGGCTACG GCGACCAGCC GCTATACGAT CTCGAGGCGA CGATCACCGA TCGGAGCGGT GCCGGCGACC CGACCAGTCA CACCGTGACC GACCGGCTGG GCTTTCGCGA CCTGGAAGTC GTCGTCGAAC CCGACGCGGA GGGGTCGTCG TTTCACTTCA CGGTCAACGA CACCCCCGTC TTCGCGAAGG GAGCGAACAC GATCCCCGTC GCGCCGCTGT ATGGCGACGT AACCCGCGAC CGCTACGAGC ACCTTATCGA GAGTGCCGCC GCGGCGAACA TGACCATGCT CCGGGTCTGG GGTGGCGGCT ACTACGAGAA CGACGCGTTA TACGAGTTGT GTGACGAACA GGGGCTGCTC GTCTGGCAGG ATTTCATGTT CTCATGTGCG CTCTATCCAG CCGACGACGC CTTTCTGGCG ACCGTCGAGG AGGAGGTCCG CTATCAGGTC CGTCGGCTGG CGAATCACCC CTCGATTGCA CTCTGGTGTG GGAACAACGA GAACGAGGAG GCCCTCCACA ATTGGTTCGT CGACCACCCG GCCCACGATG AACAGGTCGC GGATTACGAG GCGCTCTACG AGGAGACCGT CGGGCCGGCC TGTCGCGACG AGGATCCCTC GCGGACGTTC TGGCCGGGCT CGCCCTCCAG CGGCCCCGAC GCCGAGGACC CCTACGAGTT CGGGTCGGGT GACGTCCACT ACTGGGACGT CTGGCACGAG GGCCAACCGT TCGAGGACTA CTACACGACG GAGCCTCGCT TCGTCTCGGA GTTCGGCTAC CAGTCGTTCC CGTCGGTCGA ATCGCTGCGG ACGGTCATCC CGGACGACCA GTTGAACCCG ACTGCCCCCC TCATGGAGCA CCACCAGCGC AACCCCGGCG GGAACGCGAC GATCCTCACC CGACTGGCGT CGTACTTCCG GGTGCCCTTC GACTTCGAAG ATTTCGTCTA CCTCTCCCAG CTGCTCCAGG CCGAGGCGAT GTCGACGGCC ATCGAGCACT GGCGGCGTCG TAAACCCGAG ACAATGGGGG CGCTGTACTG GCAACTCAAC GATCTCTGGC CCGTTGCGTC GTGGTCGTCG ATCGAATACG ACGGGACGTG GAAGGCCCAG CAGTACGCCG CCCGCCGGCA GTTCGCACCC GTTCTCGTCT CCTTCCATCC CGAATTCGAG GGCGACACCG GCGGCGAGAA CGCGGGGGCC GACGACGAAG CCGAACGCGA TTTCGGGGAG ATCACCGCCC AGACGCTGTG GCTCACCAGC GACGACCCGC GGCCGCTCGA CGGCGAGATC ACCCTCGAAG TTCTCACCTT CGACGGCGAA GTCCTCATCG AACGAACCGT CGAGGTGAAC GTCGAAGCAG GCGAGAGCAC GCCGCTTGGG ACCGTCGACC GTGCGGATCT GCCTGCCGAG GTCGATCCGG CGACGGTGAT GATTCGAGCC GAATACGACG GGCCGGGGGA ATCCTATCCT GCGACGGCCG TCTTCGAGGA CTACAAGGCG CTCGAGCTGC CGGCTGTCGA CCTCGACGTG ACGATCGACG GCGACGAAGT GACAGTCAGC GCGCCCGAGG GGGCCGCCCT GTTCGTCGAG CTCGACGCCG GACCACTCAC GGGGTGGTTC ACAGACAACT ACGTCGACCT GCGGCCCGGC GAGACGCGGA CCGTCGCCTT CGAGGCCCGT GAGAACCACC GCGACGGCCT GATCGAAGCC CGCCTCCGGG AGCACCTCTC GACGAGGCAC CTCCGGGAGA CGTACTAG
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Protein sequence | MQKKFLNGRW EFRDPDGEWL DGTVPGGVYT DLRTNGVIDD PFVADNELDV QWVGRTDWTY RRTVDVEPAM LAHDRVLLGC DGLDTVATVR VNGEVVGESV NMHVANEFDV ADALKRGENE IRIEFRSPVE YALERQEAHP HEVPHTHYPV EQPGRPFIRK AQCHFGWDWG PSLPTTGIYR DISLVAYSAP RITHTTTEQD HDGERIDLTV RVGIDAPSAG ECELAASVAD GETTETVVLG AGEQEVELTL GVEDVDLWWP NGYGDQPLYD LEATITDRSG AGDPTSHTVT DRLGFRDLEV VVEPDAEGSS FHFTVNDTPV FAKGANTIPV APLYGDVTRD RYEHLIESAA AANMTMLRVW GGGYYENDAL YELCDEQGLL VWQDFMFSCA LYPADDAFLA TVEEEVRYQV RRLANHPSIA LWCGNNENEE ALHNWFVDHP AHDEQVADYE ALYEETVGPA CRDEDPSRTF WPGSPSSGPD AEDPYEFGSG DVHYWDVWHE GQPFEDYYTT EPRFVSEFGY QSFPSVESLR TVIPDDQLNP TAPLMEHHQR NPGGNATILT RLASYFRVPF DFEDFVYLSQ LLQAEAMSTA IEHWRRRKPE TMGALYWQLN DLWPVASWSS IEYDGTWKAQ QYAARRQFAP VLVSFHPEFE GDTGGENAGA DDEAERDFGE ITAQTLWLTS DDPRPLDGEI TLEVLTFDGE VLIERTVEVN VEAGESTPLG TVDRADLPAE VDPATVMIRA EYDGPGESYP ATAVFEDYKA LELPAVDLDV TIDGDEVTVS APEGAALFVE LDAGPLTGWF TDNYVDLRPG ETRTVAFEAR ENHRDGLIEA RLREHLSTRH LRETY
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