| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_2395 |
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| Symbol | |
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| ID | 8384694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | + |
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| Start bp | 2447690 |
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| End bp | 2451355 |
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| Gene Length | 3666 bp |
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| Protein Length | 1221 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644973468 |
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| Product | glycoside hydrolase family 5 |
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| Protein accession | YP_003131294 |
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| Protein GI | 257053461 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2730] Endoglucanase |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.740563 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACACA ACAATCCAGA CGACGACAGT ACAGCCCGAC GAACGACCGA GTCGACGGAG
TCACCGTCAA CTGCCGGCAT CGCGAGCGCG TCACGGCGGG ACTTCCTGAA AGCAGCAGCG
GCAGGCGGCG CGATCGCGAC CGGCTTCGGC GGTGGCCTCG TCGGGAGTGC GGCCGCGGAC
GTCATCCCGA CGCCGCCGCT GCACGTCGAT GGCAACCTCA TCAAGGACCC CGACGGCGCG
ACGGTCAACC TCCGGGGGGT CAACATGGCC GATCCCAAGC GGATCAACGT CACCGCGCCG
GCCAGGGGCA AGACCGCGAC GGACGTGGTC GACCTGCTGA CGAACACGGA CGACGACTGG
CATTCCCGGG TCATCCGGAT CCCGGTCCAG CCGGTCGACA TCGGCGAGCA CGAACCCGGT
GAAGGGCCGC CGCCGGTCGC CTTCGACGAG GGCCAACTCG AGACGTATCT CGAGGAGCAT
CTCGACCCGG TAATCGAGCG GTGTCTCCAG CGCGGCGCGT ACGCCATCAT CGACTATCAT
CGCCACCGTG ACGTCCAGTG GAACGACGAC ACGCTGGGCG AGGAAGTCGA GATGTTCTGG
GACACCGTCG CGCCGCGGTA CGCCGACCAG CCCCACGTCA TGTACGAACT GTACAACGAA
CCGACCGAGC CGGGGATGTG GGGCGATCCG ACCCAGAGCC AGAACTGGGC GGACGTCTGG
CGGGACTGGA AGGCGACGGC CCAGCCGTGG GTCGACACCA TCCGCGAGCA CGCGCCCGAC
AACCTGATCC TGATCGGGTC GCCCAGCTGG TCACAGAGCC CCGAGGGGGC CCTGGTCGAG
CCCTTCGACG GCGAGAACCT CGCCTACACC TTCCATATCT ATCCCGGGCA CAACTCGAGC
CAGCAAAACG ACTGGGAGGA CGCCACCAAC AACGGCGAGG GTGTCGCCGG CGTCTACGAG
GAGTACCCGC TGTTCGTCAC CGAGTGGGGC TGGGAGGAGA ACGGTGGCCA GTACATCGGC
GGGACGACCT CCGGCTATGG CGAGCCGTTC CTCGAATTTT TGGAGAAGAG TGACGCCATC
CACTGGACAG CTTGGTGTGC CGACCCCGTC TGGCGGCCAG TCATGTTCGA CCGGGCGTTC
ACCGAGGAGA GCTTCGAGGA CAACATCGGC AACCCCTACG CGGAGGACGT GCCCGAAGAC
TGTGCCGACC TGCCCTGCGA CTGGACGTTG CTCGGGGGCG ACAGCTACAT GGGCGAGACC
GTCAAGAACG CCCTGATCGA CTACCAGGAC GCCAACCCGC CGACAGTCCC CTACGACGAG
CAACCGCCGA CCACCCCGTC GAACCTCACC GCCGAAAACG TCACCGAGAC GACGGTCGAG
CTCTCCTGGG ACGGCTCGAC CGACCAGGGC GAGGCGGGAC TTTCCCATTA CAACGTCACC
GTCGACGGCC AGAAGATCAC ACAGGTGCCC GAAGCGACCA CGGCCACGAC CGTCGAGGGA
CTGGAATCCG ATACGACAGT CACGATCGGC GTGAGCGCGG TCGATCGAGC GCGCAACGAA
TCCGAGACGG TGACCGTCGA GGTGACGACC GATGCCTTCG AGGACTCGAC GCCGCCGTCC
GTGCCGGCGA ACCTCACCTC GCCGGAGAAC ACCTGGCAGT CGGTGGCCAT TTCCTGGGAC
GACTCCACCG ACGAAGGTGA CGCCGAAACC GCGGGACTCG ATGGCTACGT CGTCTACGTC
GACGGCGAAC TCGAACGCGA GGTCGCCGCC GAGACCACGC AAGTCCAGAT CGGCGGCCTG
GATTCGGACA CCACCTACGA GTTCGGCGTC AGTGCGGTCG ACCGTGCCGA CAACGAGTCC
GACATCGCGA CCATCGACGT CACGACGGAT CTCGCCCGCG CGGGGCCGAA CGACCTGCTG
ATCAACGACT ACGACGGCGA CCCGGCCTGG CCGGATTCGA ACGACCTCGG CAACTGGGTC
GGCACCGGCG GCTTCGAGAG CGCAGAGGTC GTCGACGGCC GCCTCGAAAT CGACTACAAC
GCCAGTGGCT GGTACGGCAC CGGCGTCTCC CAGGACATCA CCGACTACCC GACGCTGCGG
ATGAAGGTGA CCGGCGAGAA CGGCGGCGAG CACCGCGGCA TCGAGTTGCA GTTTGCGGGC
ATCGACCCAT TGCTCTCGGA GGTCACAGAC GACACGATCG GGACCACCGA GTCCATCGTC
TCGGTCGACC TCGAGGCGGC CGGTGCTGAC CTCGAATCAC CCGGCCAGCT TACCCTCCGG
TTCTACGATG CCGGCGATAG CTCGATCTCG ATCGACGAAC TATGGCTGGA CAGCGACGAA
CCCGATGACG ACGGCGACTC GATCGCCCCG ACGGCCCCCG CGAGCGTCGA GTCGCCGACC
CAGTCGGAGA CGGCCGTCGA GATCGAGTGG AGCGCTTCGA GCGACGACGG AGGCTCGGGA
CTCGATCACT ACAACGTCTC CGTCGACGGA AGCATCGATC AGCAGGTGCC GGCTGGGACG
ACCGCCGCGA CGATCGAGGG GCTCGACGCC GGGTCGAGCT ACGAGATCGG TGTCTCGGCG
GTCGACGGCG CCGGCAACGA GTCCAGCCAG ACGACGGTGA CGGTCTCGAC GGCCGGTGGC
GACGACGAAC AGGCACCGAG TGCGCCGGCG AACCTCACCT CGACGGACCG GACCGACACA
TCGATCGATC TCGCATGGGA CGCCTCGACC GACGAGGGTG GGTCCGGCCT AGATCACTAC
ACCGTCGCCG TCGCCGGTGA ACAGGTCCAG CAGGTTGACG CGGGGACGAC CACCGCGACG
GTTTCGGAGC TCTCGCCAGG AACGAGCTAC GACATCGCCG TCACGGCGGT CGACGCTGCC
GGCAACGAGT CCACTCCGGC GACGCTGACG GTGGCGACGA CCGACGGCGA CGACCAGCAA
GCGCCCACGA TGCCCGGGAA CCTCTCGGTC ACCGGATCGA CCGCCGCCTC CATCGCCGTC
TCCTGGGACG CCTCGACGGA CAGCGGTGGG TCCGGGCTGG ACCACTACAC CGTCTTCCTC
GACGGGAGCC AGGACCAGCA GATCGAGGCC GGCACGACGG AGGCGACAGT CGTCGGGCTC
TCCGCCGACA CAACCTACGA GATCGGGGTT TCGGCCGTCG ACGGCGCGGG CAACGAGTCC
GAGACGGTAA CCATCGAAAC GACGACGCCC CCGGGCGATC CGGTGGCCGG ACTCGTCGTC
AACGACTACG ACGGCGATCC GGCGTGGTCG AACCACCGGA ACGATCTGGG CAACTGGTGT
GGGGCCGGCT CCTTCGCAAA CGGCGGTGGC GACGTCGAAG ATGGCGCACT CGTCCTCGAA
TACGACAACG CCGGGTGGTT CGTCGAGCAG ATCCAGCAGG ACGTCAGCGA GTACTCCTCG
ATCGTCTTCT CGATCGCCGG CGCGAGTGGC GGCGAGGGCG ATCACTTCGT CGTCGGCGTC
GGCGGCAATC GCTCGACGTT CAGCGACGTC GCGGACGGCT CGATCGGGAC CTCGGTCGCT
GACGTCGCGA TCGACATGGA ATCGGCCGGC ATCGACGCCG GATCACTGGG TGAACTCCGC
CTGAACTTCT GGCAGGCCGG CTCCGGGAGC GGGACACTTC GGATCGAGGA GATCCGACTG
GAGTGA
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| Protein sequence | MTHNNPDDDS TARRTTESTE SPSTAGIASA SRRDFLKAAA AGGAIATGFG GGLVGSAAAD
VIPTPPLHVD GNLIKDPDGA TVNLRGVNMA DPKRINVTAP ARGKTATDVV DLLTNTDDDW
HSRVIRIPVQ PVDIGEHEPG EGPPPVAFDE GQLETYLEEH LDPVIERCLQ RGAYAIIDYH
RHRDVQWNDD TLGEEVEMFW DTVAPRYADQ PHVMYELYNE PTEPGMWGDP TQSQNWADVW
RDWKATAQPW VDTIREHAPD NLILIGSPSW SQSPEGALVE PFDGENLAYT FHIYPGHNSS
QQNDWEDATN NGEGVAGVYE EYPLFVTEWG WEENGGQYIG GTTSGYGEPF LEFLEKSDAI
HWTAWCADPV WRPVMFDRAF TEESFEDNIG NPYAEDVPED CADLPCDWTL LGGDSYMGET
VKNALIDYQD ANPPTVPYDE QPPTTPSNLT AENVTETTVE LSWDGSTDQG EAGLSHYNVT
VDGQKITQVP EATTATTVEG LESDTTVTIG VSAVDRARNE SETVTVEVTT DAFEDSTPPS
VPANLTSPEN TWQSVAISWD DSTDEGDAET AGLDGYVVYV DGELEREVAA ETTQVQIGGL
DSDTTYEFGV SAVDRADNES DIATIDVTTD LARAGPNDLL INDYDGDPAW PDSNDLGNWV
GTGGFESAEV VDGRLEIDYN ASGWYGTGVS QDITDYPTLR MKVTGENGGE HRGIELQFAG
IDPLLSEVTD DTIGTTESIV SVDLEAAGAD LESPGQLTLR FYDAGDSSIS IDELWLDSDE
PDDDGDSIAP TAPASVESPT QSETAVEIEW SASSDDGGSG LDHYNVSVDG SIDQQVPAGT
TAATIEGLDA GSSYEIGVSA VDGAGNESSQ TTVTVSTAGG DDEQAPSAPA NLTSTDRTDT
SIDLAWDAST DEGGSGLDHY TVAVAGEQVQ QVDAGTTTAT VSELSPGTSY DIAVTAVDAA
GNESTPATLT VATTDGDDQQ APTMPGNLSV TGSTAASIAV SWDASTDSGG SGLDHYTVFL
DGSQDQQIEA GTTEATVVGL SADTTYEIGV SAVDGAGNES ETVTIETTTP PGDPVAGLVV
NDYDGDPAWS NHRNDLGNWC GAGSFANGGG DVEDGALVLE YDNAGWFVEQ IQQDVSEYSS
IVFSIAGASG GEGDHFVVGV GGNRSTFSDV ADGSIGTSVA DVAIDMESAG IDAGSLGELR
LNFWQAGSGS GTLRIEEIRL E
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