Gene Huta_2284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_2284 
Symbol 
ID8384581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand- 
Start bp2333304 
End bp2334407 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content69% 
IMG OID644973356 
Productpeptidase S1 and S6 chymotrypsin/Hap 
Protein accessionYP_003131184 
Protein GI257053351 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.135107 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCCAG AGACATCTAC ACGGCGGCGG TTTCTGGCGC TCGGCGGAAC GGCACTCGCG 
TCCGCGATCG CGGGGTGTTC GACGTCGCTG TCGGCACCCG AGTCGTCGCC AGGGGAGTCG 
CCGTCGCCCT CCGCAGCCGG AGAGTCTCCC GAGACGGACA CAGCCGAGAG TCCCTACACC 
CGGGTGTACC GCGAGACCAT CCCCTCGGTC ACGACCGTCC AGACGACGAC CGGCCAGGGA 
ACCGGCTTCC AGTACGACGA GGGGCACGTC GTCACGAACG CCCACGTCGT CGGGACGGCG 
AGTGAGGCGC AGGTCCGCTT CCACGACGGG ACGTGGGCGA GTGGCCCGGT GGTCGGGACG 
GATCCACACA GCGACCTCGC CGTGATCGAA CCCGGGACAG TGCCCGATTC CGCAGCGCCG 
CTCCCGTTCG GCGACCAGCC GCCGACGATC GGCCGGGAGG TCGTCGTCAT CGGGAACCCG 
TACAACCTCG ACGGGTCGGT CACGTCGGGG ATCGTCAGCG GCACCGACCG GCTGATCCCG 
TCGCCGGCGG GCTATCAGAT TCCGGACGCG ATCCAGACCG ACGCGGCGGT GAACCCGGGC 
AACAGCGGCG GCCCGCTGAT GGATCTCGAC GGTTCCGTGG TGGGCGTCGT GAATTCGAAG 
CAGGGCGACA GCATCGCCTT CGGGATCTCG GCTGCGCTGA CGCAGCGCGT GGTCCCGGAA 
CTCATCGAGT CGGGAACCTA CGAGCACGCC TACATGGGCG TCTCACTCGA CGTGGTCACG 
CCGCGGCTCG CAGAGGCGAA CGACCTGGCG GAGCCACAGG GCCTGCTGGT CGTCCAGACC 
GTTCGTGGTG GCCCGGCTGA CAGCGTCCTC CAGCCCAGTA GCATCGAGTA CGTCGGTGGA 
CGCCAGGTCC CCGTGGGTGG CGACGTTATC CGCGCCATCG ACGGGACGCC GATGGAGACC 
TTCGAGGACC TGGCGAGCTA TCTGGCGCTG GAAACCCGGC CCGGTGATAC CATCGAGGTC 
GCGATCCTGC GGGACGGTGA CGAGCGAACC GTCGAGGTGA CGCTCGATGC CCGCCCGGAC 
CGCTCGACGT CACCGCTCCG TTGA
 
Protein sequence
MTPETSTRRR FLALGGTALA SAIAGCSTSL SAPESSPGES PSPSAAGESP ETDTAESPYT 
RVYRETIPSV TTVQTTTGQG TGFQYDEGHV VTNAHVVGTA SEAQVRFHDG TWASGPVVGT 
DPHSDLAVIE PGTVPDSAAP LPFGDQPPTI GREVVVIGNP YNLDGSVTSG IVSGTDRLIP 
SPAGYQIPDA IQTDAAVNPG NSGGPLMDLD GSVVGVVNSK QGDSIAFGIS AALTQRVVPE 
LIESGTYEHA YMGVSLDVVT PRLAEANDLA EPQGLLVVQT VRGGPADSVL QPSSIEYVGG 
RQVPVGGDVI RAIDGTPMET FEDLASYLAL ETRPGDTIEV AILRDGDERT VEVTLDARPD 
RSTSPLR