| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_2177 |
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| Symbol | |
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| ID | 8384471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | - |
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| Start bp | 2227143 |
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| End bp | 2228891 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644973246 |
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| Product | tRNA-guanine transglycosylase, various specificities |
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| Protein accession | YP_003131077 |
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| Protein GI | 257053244 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1549] Queuine tRNA-ribosyltransferases, contain PUA domain |
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| TIGRFAM ID | [TIGR00449] tRNA-guanine transglycosylases, various specificities
[TIGR00451] uncharacterized domain 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.881691 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGAGT ATTTCGAAGT GATCGACCGG GACGGGGCCG CCAGGATCGG CGACCTCAGG
CTGGCCGCGT CGATCACCAC GCCGGCGCTG ATCGACGACG TGCTCGTCGA CGCCGGTGAC
CTCTGGACGG AAGATCGCCA GGTCCCGGAT GGCAGCGACG ACGAGTTGAC GGTCCTGCCC
CACCGCGGGT TCCCGGCCGG GACGCCCGAT GAAGTTCAGA CAGCCTTCGA CCCCGCCGTC
CCGGACGTCG AGTATCCCAG CGCCGCCGTC ATCTCCCCGG AGACGGCTGC CGATCACGGC
ACCGACGCGT ACGTCCTCGC CGGCGGGGCC GGCCTGGTCG GCCACAGCGA GGCGTTCGTC
GAGGCCATCG TCGAGACTCG GGAGTCGATC CCGCCGGACG CCGGGCTCTA CCTTCCAGGC
GTCGCCTCGC CAGGCAACGT CGCCACCCTC GCGTACGCCG GGGTCGACCT CTTCGACACG
GACCGCGCCG TCGTCCGTGG GACGCAAGGC TGGTATCTCA CCCGCGACGG CGAGTATCGA
GTCGACGACC TCGACGAACT CCCGTGTTCG TGCCCGGCGT GTCAGCAGGC TGTCGAGGAC
TTCGACCGCG AGGACTGCGT CGAGCACAAC GAGAACGTCC TCGACGCCGA GCTCCGGACC
GTCCGCAACC GGATTCGAAA TGGGGAACTT CGGGACTACA TCGAGGGCCA GGCCCGCCAC
GAGCAGTGGC TGACCGCGAC GATGCGTCGG CTGGACGACG AGTACGACTA CCTCGAAGGG
CGGACGCCGC TGCTCCGGAA GGCGGAGATC ACGGCGTCGA CCGACGACAC CCTCCGGCGG
GTCGAGATCC AGCGCTTCGC CGAGCGGGTC ACCGACCGCT ACCGCAACCG CTTCGATGCC
CCCCTCGTTC TGGTGCCGTG CTCGGCGACC AAACCCTACA GCGACTCCCA GAGCCACGGC
CAGTTCCGCG AGGCGATCAA CTACCGCGGG CACGTCGCCT CGATGACCTC GCCGATCGGC
GTCGTCCCCC AGGAACTCGA ACTCACCTAC CCGGCCCAGC ACTACGACAC CGTCGTCACC
GGCCGGTGGT CCGAGACGGA GATCGAATTC GTCGCGGATG TGCTCGAAGC CTACCTCGCC
GCCAACGACT ACCCGCGCGT GATCGCCCAC GTTCCCGAGG ACTACCGGGC GATCACCGAG
CGCGTCGAGG ATCGGCTGGA TCGGGAGTTC GAGTACACCG TCGTCGACCA TCCCACGACC
GACGAATCGC TCGCGAACCT CTCGGAAGCG CTCGCGGGCG AGCAAAAGTA TCGCAAGCGT
GAGCGCCAGC ACAACGTAAT CCGCGCCATC GCCGACTACC AGTTCGGCGC GGACGCTGGC
AACGAACTCT TCGGGGACTT CAGCGTCGAG AGTCGCTATC CGAAGCTCCG GGTTCGAGAC
GACGACGGCG AGCAACTCGC CGCGATGGTG CCCGAGTACG GCGTCCTCGC GCTGACGCTC
GCCGGCGCTC GTCAGTGGGT CGATGCTGAT GTCCCCACGA AGCGCGTCGA GATCGACGAT
TTCGTCCCCC ACGGCAGCGT GCTCGCGCCG GGGATCATCG ACGCCGACGA CTCGATCCGC
GTCGGTGACG AAGTGGTCTT CGAAGGGCCC TCGGCGTTCG CGGTCGGCCG GGCGAACATG
AGCGGGCCGG AGATGGTCGA CAGTTCGCGC GGGATCGCCA GCGAGGTCCG CCACGTCGAA
GAAAAATGA
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| Protein sequence | MTEYFEVIDR DGAARIGDLR LAASITTPAL IDDVLVDAGD LWTEDRQVPD GSDDELTVLP
HRGFPAGTPD EVQTAFDPAV PDVEYPSAAV ISPETAADHG TDAYVLAGGA GLVGHSEAFV
EAIVETRESI PPDAGLYLPG VASPGNVATL AYAGVDLFDT DRAVVRGTQG WYLTRDGEYR
VDDLDELPCS CPACQQAVED FDREDCVEHN ENVLDAELRT VRNRIRNGEL RDYIEGQARH
EQWLTATMRR LDDEYDYLEG RTPLLRKAEI TASTDDTLRR VEIQRFAERV TDRYRNRFDA
PLVLVPCSAT KPYSDSQSHG QFREAINYRG HVASMTSPIG VVPQELELTY PAQHYDTVVT
GRWSETEIEF VADVLEAYLA ANDYPRVIAH VPEDYRAITE RVEDRLDREF EYTVVDHPTT
DESLANLSEA LAGEQKYRKR ERQHNVIRAI ADYQFGADAG NELFGDFSVE SRYPKLRVRD
DDGEQLAAMV PEYGVLALTL AGARQWVDAD VPTKRVEIDD FVPHGSVLAP GIIDADDSIR
VGDEVVFEGP SAFAVGRANM SGPEMVDSSR GIASEVRHVE EK
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