Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_1993 |
Symbol | |
ID | 8384287 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | + |
Start bp | 2016296 |
End bp | 2018269 |
Gene Length | 1974 bp |
Protein Length | 657 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644973063 |
Product | aldo/keto reductase |
Protein accession | YP_003130894 |
Protein GI | 257053061 |
COG category | [R] General function prediction only |
COG ID | [COG0656] Aldo/keto reductases, related to diketogulonate reductase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGACTGTC TGTTCGTAGG TGCCGGCGCG ATCGCCGACG AGTACGCCGC CGGCCTGGCG TCGACGTCGC TCTCCCTTGC CGGGGTCTGT GATCTCGACG CCGAATGCGC GGAAGGGCTC GCTGCGGAGC ACGACTGCCC GGCGTTCACT GATCTGGAAA CAGCACTGGC ATCCGTCGAC GCGCCAGTGG TGGTGAACCT GACGACCCAC GCGGCCCACG CCGAGGTGAC CCGGACGGCG CTTTCGGCGG ATCGACACGT CTACTCCCAG AAACCGCTCG CGCTCGACGC CGAGACCGCC GGCGAGCTAC TGGAGATGGC CCGTGAGCGC GATCGCGCAC TCGGTGTCGC GCCGGAGAAC CCTGACGCCC CGTCACAGCG CCGGGCTGCC CGCGTCCTGG CCAGCGGACG GCCGGGTCCC GTGCAACTGG GTTACGCCCA CGCCCACGTC GGCCGCGTGA CTGACTGGCA CGACCGGCCC GACTCGTTTC TTTCGATCGG GCCGCTGTAC GACGGTGGCG TCTACCCGCT GACGCTGCTC GTCTCGTGGT TCGGCCCGGT CGAAACAGTC CGCGTCGCCG ACGCCCTCGA CATCTGGCCC GAGCGCGAGT CGAAACGGCC CTCGACACCC AGCCACATCG AGGCGACGCT CGCCTTCGAA TCAGGACCAA CCGTCCGGCT GACGGCCAGT TTCTACGCGC CCCACCGGAG TCGAGAGTTC TACGGCCTCG AAGTGCACGG CGACGACGGA TCGCTGTATC TCGAGGGCAC TGGCGCGATG GAGACCGCCG TCGATGATGT TCAGTTCGGT CGCGTCGGTC GCGAGTACAC CGCCGTGCCG CTCCAATCAC CCACGTCGTC GGTCGAATAC GCCGACGCTG TCGAGCGACT CGCTGACAGC GTCACCGCGG GAACGCCTTC CCGGGAGACT GGTCGACGGG GTGCCCACGT CGTCGCCGTC TGCAACGCCA TCGAGGTTGC TGCTGCCAAC GGCGAACCGA TCGACGTGCC GGCCTATGGG ACCACAGCCG ATCCACTGCC TGCGACAGCT GTTCGGCCGG AGACTGCGGA CGAGCGTTCG ACCGGCAGTG ACGGGATTCG ACTCCCGCCG GTCGGCTTTG GCTGTTCGCG GTACCGTGAC GGCGAGTACG TCGACCGCCG GGACTCCATC GCCACGGCGC TGGACGCGGG CTATCGCTTC CTCGACAGCG CTGAACTCTA CGGCAACGAA CATCGGATCG GCGAGTTGCT CGCGGCCCCG GGCGCGCCGG ACCGGGAAGC CGTCTTCGTC CTCGGGAAGG TCTGGCGGAC GAACCACTGT CGCGAGCACA TGATCGAGGC CGCCGAGGGG AGTCTCGCGG AACTCGGTCT CGACGCCTTC GACAGCTACG GCCTCCACTG GCCCGACGCC TGGGCACACC GCGGGTCGCT CGACCGACTG GCGGAGTTGC CGGTGGAAAA ACAGGAGGCC CGCTCCTTCC CCGAAACCGA CGACGGCGAT ATCGAGACGG CCGACATCTC GCTCGAAACG GCCTGGGAGA ACCTCGAAGC TGTTTACGAC CAGGGACTCG CCCGGACGCT TTCTGTCTCG AACGTCACCC GATCACAACT GGAGACGATC CTCGAAACCG GGCGTGTTCG ACCCGAAATC GTCCAGATCG AGCGCCATCC CTACCAGCCA CAGAATGAGC TCGTCTCGTT CTGTCAGGAG CGCGGTATCC GGGTGGTCGC CCACTCCCCA CTGTCCGCCC CCGGCCTGCT GGACGAGCCG ATACTCGCAG AGATTGGCGA AGAACACGGC CTCTCGCCGG CCGAGGTCGT CATCGCCTGG AACGTCTCGG AAACCGTCGT GCCGATCCCG TCGAGCACGA CGCCGGCCCA CATCGTTTCG AACCTGGCCG CAGCCCGAAA ACGCCTTGCG CCCGCGGAGA GCGAGCGGAT CGACGCACTT CGCGATCCCG ATTTCGAGCG GTAG
|
Protein sequence | MDCLFVGAGA IADEYAAGLA STSLSLAGVC DLDAECAEGL AAEHDCPAFT DLETALASVD APVVVNLTTH AAHAEVTRTA LSADRHVYSQ KPLALDAETA GELLEMARER DRALGVAPEN PDAPSQRRAA RVLASGRPGP VQLGYAHAHV GRVTDWHDRP DSFLSIGPLY DGGVYPLTLL VSWFGPVETV RVADALDIWP ERESKRPSTP SHIEATLAFE SGPTVRLTAS FYAPHRSREF YGLEVHGDDG SLYLEGTGAM ETAVDDVQFG RVGREYTAVP LQSPTSSVEY ADAVERLADS VTAGTPSRET GRRGAHVVAV CNAIEVAAAN GEPIDVPAYG TTADPLPATA VRPETADERS TGSDGIRLPP VGFGCSRYRD GEYVDRRDSI ATALDAGYRF LDSAELYGNE HRIGELLAAP GAPDREAVFV LGKVWRTNHC REHMIEAAEG SLAELGLDAF DSYGLHWPDA WAHRGSLDRL AELPVEKQEA RSFPETDDGD IETADISLET AWENLEAVYD QGLARTLSVS NVTRSQLETI LETGRVRPEI VQIERHPYQP QNELVSFCQE RGIRVVAHSP LSAPGLLDEP ILAEIGEEHG LSPAEVVIAW NVSETVVPIP SSTTPAHIVS NLAAARKRLA PAESERIDAL RDPDFER
|
| |