Gene Huta_1900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_1900 
Symbol 
ID8384191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp1910894 
End bp1912078 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content59% 
IMG OID644972968 
Productfilamentation induced by cAMP protein Fic 
Protein accessionYP_003130802 
Protein GI257052969 
COG category[S] Function unknown 
COG ID[COG3177] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATCGCC CAGTGCGTTC CGACAGGGGC GTCCCGTTCG GGAAGTTCTA CAAACCGGAT 
CCGCTGCCGC CGGACCTCGC CCTCTCCGAT ACGGTCCTGA AGCACGTCGA GCGGGCCGCT
CACGCACTCG GCCGGCTCGA CGGATTCCGC ACTCAAGTCG ACGCAGCAGC GACCGTTTTT
CGACCGCTCC TGTACAAAGA AGCCGAACAG TCCTCACAGG TCGAGGGAAC ACAGGTAACG
ACGACCGACA TGTATCGAGC AACAGCCGCC GGGGATACTG CCGCTCGAAG CCGCGATGTC
CAAGAGGCAC TCAACTACGT CGAAGCCCTC CGGGAAGCGA GTGCTCGTCT CCTCGCGGCG
GGGCGCTCCC GGGAGAACAT CACCGCGGAT CTCATCAAAG ACCTTCACGA GACGGTCATG
GAAACCGGAT ATACTGACGA GGCGGATCCA CTTCCCGGCC AGTTCCGTCC TGACTATGCC
TGGATCGAGG AGTCGAACGA GCCCTGGAAG CAATCCGTTC GATTCGTCCC GCCGAAGGCT
GCCATGGTCG AATCGATGAT GGCCGACCTC CTCTCGTACG TCCAGTCCTC CTCAAAATAT
CCAGCGATCG TCGACGTTGC ACTCGTCCAC TACCAGATCG AAACGATCCA TCCGTTCACG
GACGGCAACG GTCGGGTCGG TCGCCTCGTC GCATTGCTCC TGTTGGTCGC CTGTGACCTG
CTCACGACAC CGCTGTTTTA CATGAGCGCA TATATCAAGG AAAACCGCGA GGAGTACACC
GATCGATTGC TGGCCGTCAG TGAGGACGGT GCCTGGGAGG AGTGGCTTCA ATTTTTCATC
ACTGGAATGA GGGACCAGGC CGAAGAAGTC CTCAGCCGTG CGAGCCTCCT CCACGAGCTA
CACGAATCGT ACGGAGCACG ATATGCGTCT GGCCCACAAT CCGTGCAACG ACTGCTGGAA
GTGCTCTTTG AACAGCCGTA TCTGACTGTG CCGACCGCCG CAGAGCGGAT CGACATGTCG
TACCCAGCAG CCAACAGTGC CGTGGAGCAA CTCGTCGAAG ATGACGTGCT TTCCCAGGTG
GACACGAAAG AGCGAAACCG GGAGTTTGTC GCCATGCAAA TCATGGACAT TGTCGAACGA
GACGCGGCCA ATCTACCCGC CCCGTCATCC GTACTGCGGT CATAG
 
Protein sequence
MYRPVRSDRG VPFGKFYKPD PLPPDLALSD TVLKHVERAA HALGRLDGFR TQVDAAATVF 
RPLLYKEAEQ SSQVEGTQVT TTDMYRATAA GDTAARSRDV QEALNYVEAL REASARLLAA
GRSRENITAD LIKDLHETVM ETGYTDEADP LPGQFRPDYA WIEESNEPWK QSVRFVPPKA
AMVESMMADL LSYVQSSSKY PAIVDVALVH YQIETIHPFT DGNGRVGRLV ALLLLVACDL
LTTPLFYMSA YIKENREEYT DRLLAVSEDG AWEEWLQFFI TGMRDQAEEV LSRASLLHEL
HESYGARYAS GPQSVQRLLE VLFEQPYLTV PTAAERIDMS YPAANSAVEQ LVEDDVLSQV
DTKERNREFV AMQIMDIVER DAANLPAPSS VLRS