Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_1747 |
Symbol | |
ID | 8384033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | + |
Start bp | 1757206 |
End bp | 1758780 |
Gene Length | 1575 bp |
Protein Length | 524 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644972813 |
Product | putative PAS/PAC sensor protein |
Protein accession | YP_003130652 |
Protein GI | 257052819 |
COG category | [R] General function prediction only |
COG ID | [COG3413] Predicted DNA binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACACCG ACTTCGAGCG CGCACCGATC GGGGTTCTCG AAGTGAGTCC GGACGGCGTC GTCCGCGACG GCAACGCCAC GGCAGCGTCT GTCCTTGACG TAGCCCCTGA CGCCGTCGCC GGCGAGCCGA TCGGGCGTGT CTTTCCCGAA TCTGTCGAGG GCCAGGTCCC GGGGGCGTTC GAGACCCCGC CGGACGCGGA GCAGTCCTTC GAGGCGTACT ATCCCGACCT GGACAGGTGG CTCGTGGTCG ATCTCGTCCC CGCAGCGGAA GTCGTCTACG TCTACCTCCG GGACGAAACC GACGCACACC GGCGCGAGCA GCAGCTCGAC TCGCTTCGAT CGGACCTCCG CCGGCTGACG ATCGGGAACG AACTCCTCGC GGACGTGCTG GGCGACCTCG TTTCCGCCTC GACGCGCGAA GAGATCGCCG AAACCATCTG CCGACAGCTT GGTGAGACTG ATATCTACGA GTTCGCGTGG GTCGGCGAGC GCGCGGTCGG CTCCACGGAG ATCGTACTGC GGGCCGCTGC CGGTACAACA GGGCGCACGC TCGACCGGAT CGAAACCGCT CTCGATGGCG ACGCCGACCT GCCGGAGTTG CGCGCGATCG AGCGGGGCGA ACCGACGGTC GTCGAGTCAC TCGGCGCGGA CGAATCCGTC CCGGAAACGA TCCGCCGGGC GGCCTTCGCC GACGGATTGG GGTCGCTGCT TGCCGTCCCA CTGACCTACG GCTCGAGCGT CTACGGCGTC GTCGGCGTCT ACGCCACCGA GAAGGACGCC TTCTCCGAAC GCGAACGGGA GAGTTTCGGA ACCGTCGGGA CGATGGCCGG GTTCGCTATC AAAGCGGCTC GCAACCAATC GCTGCTCACT GCCGAGCGGG TCGTCGAACT CACGCTCCGG GTGTCAGATC CCGCGACGCC GTTCGTCGCC GCGGTTTCCG ACACCGACAC CCGGATCGAC GTGACGGGTG TGATCCCGCA GGGAGAGGAG CTACTCTGTT ACGTCGAGAC CGAGACTGAC CAACGGGGGC CCGAGGCGGT CGCAACTGCG TTGGCGGAGC ACGAATCGGT CGTTGCGACG CGAACAGTCG GGAAACACGA CGACGGCGGA TCGATCGAAC TCCGCCAGCG GGCCGAGACA CCGCTCGGAC AACTCCTGAG TCAGGGCGGG ACAGTTCGGT CGGCCACGTT TGGTCCAGAT GGGGACCGGG TCGTCGTCGA ACTCCCGCTG TCGGAAGACG TCCGCCGGAT CGCGGACGCG ATCACGCGCC GGTACGACGC CGAGGTACTC GCCAAGCGGG AACGCCGGCG GGACGAACGG ACAACCGGGG AGATCCGGGA CGGGCTGACC GCTCGACTGA CGGACCGCCA GGAGGAGGCG CTTCGCACCG CGTTCTTCGC GGATTACTTC GAATCGCCAC GGGGAAGTTC CGCCGAAGAA GTCGCTGATG CCCTGGGAAT TACTGGACCA ACGCTGCTTC ACCACCTTCG GGCAGGACAG CGGAAACTCC TGGCAGAACT CTTCGAGGCG ACAGATCGGC GGCTCGACCC TGACCGATCG TCGGACGGGA CCTGA
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Protein sequence | MDTDFERAPI GVLEVSPDGV VRDGNATAAS VLDVAPDAVA GEPIGRVFPE SVEGQVPGAF ETPPDAEQSF EAYYPDLDRW LVVDLVPAAE VVYVYLRDET DAHRREQQLD SLRSDLRRLT IGNELLADVL GDLVSASTRE EIAETICRQL GETDIYEFAW VGERAVGSTE IVLRAAAGTT GRTLDRIETA LDGDADLPEL RAIERGEPTV VESLGADESV PETIRRAAFA DGLGSLLAVP LTYGSSVYGV VGVYATEKDA FSERERESFG TVGTMAGFAI KAARNQSLLT AERVVELTLR VSDPATPFVA AVSDTDTRID VTGVIPQGEE LLCYVETETD QRGPEAVATA LAEHESVVAT RTVGKHDDGG SIELRQRAET PLGQLLSQGG TVRSATFGPD GDRVVVELPL SEDVRRIADA ITRRYDAEVL AKRERRRDER TTGEIRDGLT ARLTDRQEEA LRTAFFADYF ESPRGSSAEE VADALGITGP TLLHHLRAGQ RKLLAELFEA TDRRLDPDRS SDGT
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