Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_1676 |
Symbol | pheT |
ID | 8383956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | + |
Start bp | 1660931 |
End bp | 1662661 |
Gene Length | 1731 bp |
Protein Length | 576 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644972737 |
Product | phenylalanyl-tRNA synthetase subunit beta |
Protein accession | YP_003130582 |
Protein GI | 257052749 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
TIGRFAM ID | [TIGR00471] phenylalanyl-tRNA synthetase, beta subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCCACTG TCGACATTGA CACTGACGAA CTGCGGGAAC TGACCGGCCA CGGCGAGAAG AGCGACGACG ACCTGCGCGA TGATCTCTTC GAACTCGGCC TGGAGTACGA GGGCGAAACC GAGGAGGGCG AACTCCGATT CGAGTTCGAG CCCGACCGCC TCGATCGCCT TTCCGTCGAG GGGGTCGCCC GGTCGCTGCG CTACCAGTAC GGCGATGACT GGGGCGTCTA CGTCCCGAAG ACCAACGGCG CCGACTGGAC GATTCACGTC GAGGACGTGC CCGAGGAACG ACCCTACGTC ACGGGCGCGG TCGTCCGCGG GCTGGATCTT GACGACGCCT CGCTGGATTC GCTGATCCAG CTTCAGGAAA AACTCCACGC GACGATGGGT CGCAAGCGCG CGAAGGGCGC GATCGGGGTG CACGACCTGA CAATGCTGAA AGGCGGCGAG GCTGCCGACG ATGGCGAGGG CAAGTCCGTC CGCTACACCG GGATCGACCG CGACGGCGAC ACCTTCGTGC CGCTGGAGGG CGACGCCGAG ATGACGCCCG GCGAGGTCCT CGCCGAGCAC CATATCGGCG AGGAGTACGC CGACCTCGTC GCCGAGTACG ATCGTGTCCC GGCGATCTAC GACTCGATCG GGCTGTTCTC GTTCCCGCCG GTGGTCAACG GCCGCCGGAC GGAGGTCTCG ACCGACTCGC GTGATCTGTT CATCGAGATG ACCGGCACCG ACCAGTGGAC GATCGATCAC ATGCTGTCGA TTGTCTGCTA CGCCCTGGAC GCCCGCGGCG GCACGATCGA GGACGTCCGC GTCGAGTACG AGGACGCCCC CGAGGAGTAC CGCGACTCGC TCCTCCGCCC CGATTTCTCG ACGAAAACCA AGACCGTCGC CCACGACCGG ATCGAGCGCA CACTCGGGAT CGACCTGCAA GGCGAGGACG TGATCGACCT CCTCGAACGA TCCGGACTGG ACGGGGAGTC TACCGAGACG GACGGGTCGC CAGCCTACGA CGTCACGATC CCCCCGTATC GCGTCGACGT CCTCCACCCC GTCGACGTGA TCGACGACGT CGGGCGGGCC TACGGCTTCA ACAACCTCGA CCCGCGCTAT CCCGCGGTCG GGACGATCGG CGGGCGACAC GAGCGCGCAC GACTCGAGGA GGCCGTCCGG ACCGTGCTGG TCGGACTCGG CTTTCAGGAC CTGCTGAACT TCCATCTGAC GAGCGCCGAG GAACTGCATG ACCGCATGGG GATAGAGCCA GGCGTGGACG CCCTGGGTGG CGGCGACCCT GTCGAGATCC GCAATCCCTA CAGCGAGGAT TACACGGTCG TCCGGACGTG GCTGCTCCCG TCGATCATGC AGGTCCTCGA GAACAACACC CACCGACGAT ATCCCCAGGA CCTCGCGGAG GTCGGGTTCG TCGCCCAGCG TGACGACGGC GCAAACACTG GCGTCGCCGA AGCCCGTCAC GTCGCGGGCG CGCTCGCGCG TCACGACGTG TCCTACGAGG ACGCCAAGGC CCGCCTCCAG GCACTGGTGG CGGACTTCGA TGCCGAACTG GAGACGCCAC CCACGGCGCA TCCCTCGTTC ATCGACGGCC GGGCCGCTGC CGTCGAGATC GATGGCGACG CGGTCGGCGT GATCGGCGAA GTTCACCCCG CTGTGCTCGT GGAACACGAT CTGGAACTGC CGGTAGTGGC CTTCGAGTTT GATCTGGCGG CGCTGCAGTA A
|
Protein sequence | MPTVDIDTDE LRELTGHGEK SDDDLRDDLF ELGLEYEGET EEGELRFEFE PDRLDRLSVE GVARSLRYQY GDDWGVYVPK TNGADWTIHV EDVPEERPYV TGAVVRGLDL DDASLDSLIQ LQEKLHATMG RKRAKGAIGV HDLTMLKGGE AADDGEGKSV RYTGIDRDGD TFVPLEGDAE MTPGEVLAEH HIGEEYADLV AEYDRVPAIY DSIGLFSFPP VVNGRRTEVS TDSRDLFIEM TGTDQWTIDH MLSIVCYALD ARGGTIEDVR VEYEDAPEEY RDSLLRPDFS TKTKTVAHDR IERTLGIDLQ GEDVIDLLER SGLDGESTET DGSPAYDVTI PPYRVDVLHP VDVIDDVGRA YGFNNLDPRY PAVGTIGGRH ERARLEEAVR TVLVGLGFQD LLNFHLTSAE ELHDRMGIEP GVDALGGGDP VEIRNPYSED YTVVRTWLLP SIMQVLENNT HRRYPQDLAE VGFVAQRDDG ANTGVAEARH VAGALARHDV SYEDAKARLQ ALVADFDAEL ETPPTAHPSF IDGRAAAVEI DGDAVGVIGE VHPAVLVEHD LELPVVAFEF DLAALQ
|
| |