Gene Huta_1611 details

Gene Information

• Locus tag: Huta_1611
• ID: 8383890
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhabdus utahensis DSM 12940
• Kingdom: Archaea
• Replicon accession: NC_013158
• Strand: +
• Start bp: 1591680
• End bp: 1592333
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 644972672
• Product: signal sequence peptidase
• Protein accession: YP_003130518
• Protein GI: 257052685
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0681] Signal peptidase I

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATCGAAA GCGAGGGCGA ATGGGCAACG AGCGCGAGAG GAAAATCGGC CATCGATCGG 
TTCCTGAAGT CCTCCCTGGC CCTGTTCGCG TTCGATACGC TGAGTAGCGT CCTGATCGTC 
GTGATGATCG GTGGGTTGCT GTTCGCGACG AGTGGTGTCT GGTCGCCAGT CGTCGCTGTC 
GAGAGTGGCA GTATGCAGCC GCATATGGAC GTCGGAGAGT TCGTGTTCGT CATGGAAGAC 
GGACGGTTCC CCGGTCCGGA ATCACAGGGG GACACGGGAA TCGTGACTGC CCACACCGGT 
CAGGAAGCGG GCTACCGGAC GTTCGGTGGG TACGGCGACG TGATCGTCTA TCAGCCCGAC 
GGAAACGAGA CGAAGACCCC GATTATCCAC CGGGCAATGT TCTGGGTCGA GAACGGTGAA 
AACTGGTACG AGCGCGCCGG TTCGACGGCG ATCGGGAACG CGGATAGTTG CGAGGAACTC 
GCCAACTGCC CGGCCCCACA CGCGGGCTTC ATCACGAAGG GAGACAACAG TGTCACGAAC 
AGCCGATACG ATCAGCTAAT GGAGATCAGT TCGCCGGTCA AACCAGCGTG GATCGTCGGG 
ACGGCAGAAG TGGGCGTCCC GTGGCTCGGG CAACTTCGCC TGGCCCGGGA CTGA 

 

Protein sequence

MIESEGEWAT SARGKSAIDR FLKSSLALFA FDTLSSVLIV VMIGGLLFAT SGVWSPVVAV 
ESGSMQPHMD VGEFVFVMED GRFPGPESQG DTGIVTAHTG QEAGYRTFGG YGDVIVYQPD 
GNETKTPIIH RAMFWVENGE NWYERAGSTA IGNADSCEEL ANCPAPHAGF ITKGDNSVTN 
SRYDQLMEIS SPVKPAWIVG TAEVGVPWLG QLRLARD