Gene Huta_1569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_1569 
Symbol 
ID8383848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp1540101 
End bp1541528 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content62% 
IMG OID644972631 
Productglycosyl transferase family 2 
Protein accessionYP_003130477 
Protein GI257052644 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACACGA TCACACACGC CGTCCTGATG GGACTGGCCG GGTTCGGCGT TTTTGTCGTG 
GGGTATTACG CATTGATCAG CGTCGGCTAC CTGTTTTTGC ACGTCCTGGC GCTGTTTGAA
CTCCGCGAAG ACGTCAAGGA GTCGCGATGG GACCCGCCGT TCCGGAAGTT CAGCTCCCCG
TTCTATCCCG GCATCGGGAT CGTCGTGCCG GCGTACAACG AGGAGGCCAC CATCGTCGAG
AGCGTCCGCT CGATGCTCTC GTTGAACTAC CCGGAGACCG AGGTCGTCGT CGTCAACGAC
GGCTCGACCG ACGCGACGCT GGATCGACTC CGCGAGCAGT TCGATCTCGA AGCCATCGAC
GCGGAGATTC CGTTCGACGT CCCCGCCGAA GAGATCCACG GCGTCTACCG GTCGACGACC
GACGAGAAGT TGCTCGTCGT CGACAAGGAC AACGGTGGCA AAAGCGACGC CCTCAATGCG
GGGATCTGGC TGACCGACAT GCCGCTGTTC TGTGCCGTCG ACGCGGATAC GATCATCGAC
CGCGATGCGC TCCTCCAGAT CGTGACGCCC TTCCTCAAGG AGCCAACGAC CGCCGTCGCC
TCAGGGGGCG TCATCCGTGT CGCCAACGAC TGTACAGTCG AGGACGGCAT CGTCACTGAC
GTCTCCCTGC CGAAGACGGG ACTGCCCGGA CTCCAGGTGA TGGAGTACCT CCGTGCCTTC
TACTCGGGTC GACTCGGTCT CAACCGGATC AACGGACTCA TCCTCATCTC GGGAGCCTTC
GGGCTCTTCC AGACGGAAAC CGTCCGCGAG ATCGGTGGCT ACAGACACGA CACGATCACG
GAGGACTTCG ACATCGTCGT GCGCCTCCAC AAACACCTGA CCGAGCAGGA CCGGGAGTAC
ACGGTCGATT TCGTCCCGGA ACCGGTCGCC TGGACGGAGG TTCCGAGCAG CCGCCGGGTA
CTCAGCCGGC AGCGAAGACG CTGGTACCGG GGGATGATGG AGACCGTCGT GACCAACCGC
AAAATGTTGT TCAATCGCGC GTATGGTCGC GTCGGGACCG TGGTGATGCC GTTTTTCGTC
GCGGCGGAAA CACTCGGCCC GCTCATCGAA GGGCTTGGAT ACGTCGTGCT CCCGGTGGCG
TGGTACTTCG GAGCGCTGGA CGTGACGTTC GTGCTCATGT TCTTCCTCCT GACGACCGGC
TACGGCGTCT TCCTGTCGTG GTTCGGCGTC TTCAGCGAGG TCTGGAGTTT CAACCGCTAC
GACAGCCCCT GGCAGGTGTT GCGCCTGCTG TGGTACGGCG TTCTGGAGAA CTTCGGGTAC
AGACAGTGGA AGACGATCGT CGCCTGGCGC GGCCTCATCG AGTATCTCCG TGGCGTCGAG
ACCTGGGGCG TGATGGAACG CAGCGGCTTC GCCGGTGAGG AGGAGTGA
 
Protein sequence
MHTITHAVLM GLAGFGVFVV GYYALISVGY LFLHVLALFE LREDVKESRW DPPFRKFSSP 
FYPGIGIVVP AYNEEATIVE SVRSMLSLNY PETEVVVVND GSTDATLDRL REQFDLEAID
AEIPFDVPAE EIHGVYRSTT DEKLLVVDKD NGGKSDALNA GIWLTDMPLF CAVDADTIID
RDALLQIVTP FLKEPTTAVA SGGVIRVAND CTVEDGIVTD VSLPKTGLPG LQVMEYLRAF
YSGRLGLNRI NGLILISGAF GLFQTETVRE IGGYRHDTIT EDFDIVVRLH KHLTEQDREY
TVDFVPEPVA WTEVPSSRRV LSRQRRRWYR GMMETVVTNR KMLFNRAYGR VGTVVMPFFV
AAETLGPLIE GLGYVVLPVA WYFGALDVTF VLMFFLLTTG YGVFLSWFGV FSEVWSFNRY
DSPWQVLRLL WYGVLENFGY RQWKTIVAWR GLIEYLRGVE TWGVMERSGF AGEEE