| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1357 |
|---|
| Symbol | |
|---|
| ID | 8383636 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | - |
|---|
| Start bp | 1328256 |
|---|
| End bp | 1329593 |
|---|
| Gene Length | 1338 bp |
|---|
| Protein Length | 445 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644972420 |
|---|
| Product | Rh family protein/ammonium transporter |
|---|
| Protein accession | YP_003130266 |
|---|
| Protein GI | 257052433 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0004] Ammonia permease |
|---|
| TIGRFAM ID | [TIGR00836] ammonium transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.442305 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGAAG CGCTCCCGTT GCAAGTCGAG CCGAGCGCGC TGACTGATGC GATCAGCAAC
GTCTGGGTAC TCACCGTCAC GTTCCTGATC TTCTTCATGC ACGCCGGCTT CGCGATGCTG
GAGGCCGGGC AGGTCAGAGC GAAGAACGTC GCCAACCAGT TGACGAAGAA CCTGCTGACC
TGGAGCGTCG GGGTGACGGT GTTCTTCGTG ATCGGGGCCG GGATCTCCGG ACTCATCGGG
GGCGATCCGT ACACCGACGC GTTCCCGTTC CTCGACGAGG AGTACATCGG CTGGCTCTAC
GGTGCCGTCT TCGCGATGAC GGCCGCGACG ATCGTCTCCG GGGCCGTCGC CGGCCGGGCG
AAACTCCGGG CGTACGTCAC CTACACGTTC CTGCTGGCGG CCGTGATCTA CCCCGTCGTC
ACGGGGATCA CGTGGGTCGG TGAGTACATC GCCGTCGGCG ACGCCGTCTT CCACGACTTC
GCGGGCGGGA TGATCGTGCA CGGACTCGGC GGGATCGCCG GCCTGACCGC CGCCTACATC
CTCGGTCCGC GGATGGATCG CTTCGGCGAG GACGGTTCGC CGAACGTCAT CCCCGGCCAC
TCGATGACGT TCGCCGTGCT GGGCACGCTC ATGCTCGCCT TCGGCTGGTA CGGGTTCAAC
GTCGGCACCG CAGCCGTCTT CGCCGAGGCC GGCCCGAACG GCGACCTGCT GGCGTTCAAC
GGTGCCGTGC TGAGTCGCGT CGCGATGGGT ACGACGATCG CGATGGCCGC CGGCGCGATG
GGTGCCGGCC TGGTCGCCTG GCTCAAGACC GACAAGGTCG ACACCCTCTA CGTCGCCAAC
GGCCTGCTGG CGGGCCTGGT CGGGATCACG GCGATCCCGG ACACGACGAC CTGGTGGGGC
GCGTTCATCG TCGGTGGTCT CGCCGGCGCT CAGCTCCCGA TCGTCTTCGG CTTCGTCGAG
AACCGCCTGA AGATCGACGA CGTCTGTGCG GTCTTCCCGG TTCACGGCAG CGCTGGCGTG
CTCGGGACGC TCGCGTTCCC GTTCGTCGCC GTCGAAGCCT GGCAAGGCGG CCTCGACCTG
GGCTTCGTGG TCGAGGGATT CATCACGCAG GTCCTCGGCG TCGTCATCAT CGCCGCGTGG
ACGATCCTCG CGACGGGGGT CGTCTGGGGC GCCCTCAAGG CGATCGGCCA GGCCCGCGTC
ACACCCGAGC ACGAGCGTGA GGGGCTGGAC CTGAGCGAGC ACGGCGTCGA GACCTACCCC
GAGTTCGGCG ACGAGGACCC ACTCGTCGCC GACGGTGGCG TCAGTGCGGT CCGCTCGCGG
GGTGATTCCG ATGAGTGA
|
|---|
| Protein sequence | MIEALPLQVE PSALTDAISN VWVLTVTFLI FFMHAGFAML EAGQVRAKNV ANQLTKNLLT
WSVGVTVFFV IGAGISGLIG GDPYTDAFPF LDEEYIGWLY GAVFAMTAAT IVSGAVAGRA
KLRAYVTYTF LLAAVIYPVV TGITWVGEYI AVGDAVFHDF AGGMIVHGLG GIAGLTAAYI
LGPRMDRFGE DGSPNVIPGH SMTFAVLGTL MLAFGWYGFN VGTAAVFAEA GPNGDLLAFN
GAVLSRVAMG TTIAMAAGAM GAGLVAWLKT DKVDTLYVAN GLLAGLVGIT AIPDTTTWWG
AFIVGGLAGA QLPIVFGFVE NRLKIDDVCA VFPVHGSAGV LGTLAFPFVA VEAWQGGLDL
GFVVEGFITQ VLGVVIIAAW TILATGVVWG ALKAIGQARV TPEHEREGLD LSEHGVETYP
EFGDEDPLVA DGGVSAVRSR GDSDE
|
|---|
| |