Gene Huta_1213 details

Gene Information

• Locus tag: Huta_1213
• ID: 8383488
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhabdus utahensis DSM 12940
• Kingdom: Archaea
• Replicon accession: NC_013158
• Strand: +
• Start bp: 1185016
• End bp: 1185702
• Gene Length: 687 bp
• Protein Length: 228 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 644972272
• Product: TrkA-N domain protein
• Protein accession: YP_003130122
• Protein GI: 257052289
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG0569] K+ transport systems, NAD-binding component

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTACGTCA TCATCGTCGG TGCGGGAGAC ATCGGGACGC CACTGATCGA CATCGCAACG 
CGATCAGGCA ACGAGGTCGT CGTCATCGAG CGCAACGCCG AACGGGCCAA CCGGGCGGCC 
GATCGCTTCG ACTGTCTCGT CCTCGAGGCG GACGCGACGA CCAACAACAC CTTAGAAGAG 
GCCGGCGTCG AGCAGGCCGA CGCCGTGGTC TCGACGACCG ACCGGGACGC GACCAACGTC 
ATGGTGTGTC TGCTCGCCAC GGAGTACGAG GTGCCGTCGA TCCTCTCGGT CGTGCACAAC 
CCCGAGCACA TGAGCCTCTT CGAGCAGATC GGGGTGAACA CCATCGAGAA CCCCCAGCAA 
CTCATCGCCG AGTACCTCTA CCGGTCGGTC GCACGGCCGG CGATCGTCGA TTACATGCGG 
ATCGGTGAAC AGGCCGAGGT CTTCGAGATC GCCGTCACCG AGAACGCACC CATGGCCGGG 
AAGACGCTCA CTGAAGCAGG AGAGGGTGAC ATCCTCCCCG AGGATACGCT GATCGTCGCC 
ATCGACCGTG AAGGGGAGGA CAGGCCACTG ACGCCCCGCG GGAACGTCCG GATCCGGCCG 
AACGATCTGT TGACGGTGTA CTCGGCACGC GGGGCCGACC CGGAACTCAC GGACGTCTTT 
GGCCATTACG AAGACCAGAC AGCATGA 

 

Protein sequence

MYVIIVGAGD IGTPLIDIAT RSGNEVVVIE RNAERANRAA DRFDCLVLEA DATTNNTLEE 
AGVEQADAVV STTDRDATNV MVCLLATEYE VPSILSVVHN PEHMSLFEQI GVNTIENPQQ 
LIAEYLYRSV ARPAIVDYMR IGEQAEVFEI AVTENAPMAG KTLTEAGEGD ILPEDTLIVA 
IDREGEDRPL TPRGNVRIRP NDLLTVYSAR GADPELTDVF GHYEDQTA