Gene Huta_0997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_0997 
Symbol 
ID8383270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp964463 
End bp965383 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content63% 
IMG OID644972061 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_003129913 
Protein GI257052080 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1087] UDP-glucose 4-epimerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAAC CTCGGGTGAG CGGACAGACC GTCCTGATCA CCGGCGGTGC CGGATTCATC 
GGGAGCCACC TCGCTGACGC ACTTGTCGAG CACAACGACG TGATCGTCCT CGATAACCTC
TCCACTGGGA AACGGGAGAA CGTCCCTGAC GGCGCGACCT TCGTCGAGGG CGACGTCCGT
GATGCGGATG TGGTCGCCGA CGTCTCCGAT GGGGTCGACC TGATCTTCCA CAAAGCCGCC
GTCGTCAGTG TCGAGCGATC GATCGACGAG CCGGCGTTCT CTCACGAGGT GAACTTCGAC
GGGACGCTGA CACTCCTTGA GGCGGCGCGA CGGGTGGATG CGCGTGTCGT CTTCGCCTCG
AGTGCGGCGA TCTACGGCGA CCCCGACACT CTCCCGATCA CCGAATCCGA TCCAGTGGAT
CCACAATCCC CATACGGGAT CGATAAGTGT GCCGCCGACC AGTACCTCCG GGCGTATCAC
GACCTCTACG GGCTGGAGAC CGTCGCACTC CGCTATTTCA ACGCCTACGG GCCGCGTCAG
ACCGCGAGTG ACTACAGTGG TGTGATCAGC ATCTTCGGCG AGCAGGCCCG CGCTGGCGAA
CCGATCACCG TCAACGGTGA TGGCACCCAG ACCCGAGACT TCGTTCACGT CTCCGACGTG
GTCACAGCCA ACCTGCTGGC CGCGACGACT GAACACGTCG GGACAGCCTA CAATATTGGC
ACTGGCGGGG AGACGTCGAT CCGATCACTC GCCGAAACGA TCCAGGCGAC GGTCGGCACT
GATTCGCCGA TCGTTCACGG CGATCCGCGA CCGGGGGACA TCCAACGGAG TCGTGCTGAT
ATCACGACGG CGCGCGAACG GCTCGGATAC GAACCTTCTG TCCCACTCGA AACGGGTCTC
GCGACGCTGT TCGATCAGTG A
 
Protein sequence
MSQPRVSGQT VLITGGAGFI GSHLADALVE HNDVIVLDNL STGKRENVPD GATFVEGDVR 
DADVVADVSD GVDLIFHKAA VVSVERSIDE PAFSHEVNFD GTLTLLEAAR RVDARVVFAS
SAAIYGDPDT LPITESDPVD PQSPYGIDKC AADQYLRAYH DLYGLETVAL RYFNAYGPRQ
TASDYSGVIS IFGEQARAGE PITVNGDGTQ TRDFVHVSDV VTANLLAATT EHVGTAYNIG
TGGETSIRSL AETIQATVGT DSPIVHGDPR PGDIQRSRAD ITTARERLGY EPSVPLETGL
ATLFDQ