Gene Huta_0942 details

Gene Information

• Locus tag: Huta_0942
• ID: 8383215
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhabdus utahensis DSM 12940
• Kingdom: Archaea
• Replicon accession: NC_013158
• Strand: -
• Start bp: 907971
• End bp: 909983
• Gene Length: 2013 bp
• Protein Length: 670 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 644972006
• Product: CheA signal transduction histidine kinase
• Protein accession: YP_003129858
• Protein GI: 257052025
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0643] Chemotaxis protein histidine kinase and related kinases

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACGAAC AATATCTCGA CGCCTTCATT CGCGAGAGCG AGGAGGCAAT CACGGAGTTG 
AACAACTCGT TACTCGAACT TGAATCGGAC CCCAGCGATC AGGCGGCGAT GGATTCGATC 
TTCCGAACAG CCCACACGCT GAAGGGGAAC TTCGGCGCGA TGGGATTCGA CGACGCCAGC 
GACCTCGCCC ACGCGATCGA GGACCTCCTC GATGCCATCC GCCAGGGCGA CATGGACGTC 
ACGCCGGAGA TCATGGATCT CGTGTTCGCC GGTGTCGACG ACATCGAAGC CATCGTCACC 
GAGATCGAAG CGAACGGTGA ACCGTCCGCC GACACGGCCG ACCGGGTCGA GGACATCCGT 
GCAGTCATGG AAGACGGTCC CGACGCCGCC GGTGCAGCGA GTGACGACGG TCGGTCGTCC 
GGTTCGGATG GTGACGTCGA CGCCGGGGCC GAGGGCGACA CCTCGGCATC CGGGCCTTCG 
ATCGATGTCG AACCGATCCT CGATCGTGTG GACGTTCCCG AGCCGGAATC GGGCACTGTC 
ACGCTTGCGG ACGTCGACAT CGGCGGCGGA GACATGCAGG GCGTCGACGC GATGCTGGCG 
CTGGACGCCA TCGAGGACGC CCTCGACGTT GTGGCGACCG ATCCATCCAC AGACGAGATC 
GAGAACGGCG TGTTCGACGA AACGTTCGCC GTGTTCGCGG CCGCCGACGA ATCGACAGTT 
CGGGCAGCGG TCGACGACGT CGGTCCCGTC GAATCCGCGA CCGTACAGGA CGTCTCGGAG 
GCAGTCGCGG CTGCAGACAC GGCGGATGAG ACGGGAGCCA CGGACGACGC CGGTACCAGC 
GCGTCCACGT CGTCGAGTGC CTCCGAGACC GCTGTGGACG AGATCAAATC CGTCCGGGTC 
GACGTCGATC AGCTCGACGA CTTACACGGC CTGGTCGAAC AGCTTGTGAC TAGCCGGATC 
AAACTTCGCC GGGCGGCCGA ACAGAACAAC GTCGATTCGA CCGGCGAGAC CCTCAACGAA 
CTCGACAAGA TCACGGCGAG CCTCCAGAAC ACCGTCATGG ACATGCGGCT GATCCCGCTG 
GGGAAGGTCG TCGGGAAGTT CCCCCGTCTC GTGCGGGATC TCTCGCGGGA CCTCGGCAAG 
GAGATCGACT TCTCGATCGA GGGCGAGGAC ATCGAACTCG ATCGGACGAT CCTGACCGAG 
ATCTCCGATC CGTTGATGCA CATCCTCCGG AACGCCGTGG ATCATGGGAT CGAACCGCCG 
GCGGAACGCG AGCGCAAGGG CAAGTCCCGG GAGGGTTCGA TCGAGTTGCG TGCCCGCCGG 
GAGCGTGATC ACGTCGTCAT CTCCGTCGAA GACGACGGTG CGGGCTTGGA CGTCGAGGCG 
ATCCGCGAGC AGGCCCGCAA GCAGGGCATC CGGTCGGCCG ACGAACTCGA CCGGATGGAC 
GACTCGGCGA TCTACGATCT CACCTTCCAC CCCGGCTTCT CGACGGCCGA GGAAGTGACG 
GGGACGAGCG GCCGCGGCGT CGGGATGGAC GTCGTCCACG AGACCGTCTC GCAACTGGAC 
GGTTCGGTCA ACGTCGAGAG CGAACCCGAC GAGGGGACGA CCGTCTCGCT GCGGCTCCCG 
GTGACGATGG CGATCGTGAA GGTGCTGTTC ATCCAGGTGG GCGACGAACA GTACGGGATC 
CCGATCAAGA ACGTCGACGA GATCACCGAC GCCGGGGAGG CGCGCGAGAT CAACGGCAAC 
GAGGTCATCA AACACAACGA CGAGATCTAC CCGATCATCC ACCTCGACGA GGCCTTCGAC 
GTCCCCGGCG AACGCACGAA CGGCGACGGG ATGCTGATCC GCGTCAGGGA ATCTGAACGC 
AAAGTCGCAC TCCACTGTGA CGAGGTCAAC AGCCAGGAGG AAGTCGTGGT CAAACCGCTG 
GAGGGACTGC TCTCTGGAAC CCCGGGGCTC TCCGGAACTG CGGTGATCGG CGACGGGAAC 
ATCGTGCACA TTCTCGACGT CGTCACACTG TGA 

 

Protein sequence

MDEQYLDAFI RESEEAITEL NNSLLELESD PSDQAAMDSI FRTAHTLKGN FGAMGFDDAS 
DLAHAIEDLL DAIRQGDMDV TPEIMDLVFA GVDDIEAIVT EIEANGEPSA DTADRVEDIR 
AVMEDGPDAA GAASDDGRSS GSDGDVDAGA EGDTSASGPS IDVEPILDRV DVPEPESGTV 
TLADVDIGGG DMQGVDAMLA LDAIEDALDV VATDPSTDEI ENGVFDETFA VFAAADESTV 
RAAVDDVGPV ESATVQDVSE AVAAADTADE TGATDDAGTS ASTSSSASET AVDEIKSVRV 
DVDQLDDLHG LVEQLVTSRI KLRRAAEQNN VDSTGETLNE LDKITASLQN TVMDMRLIPL 
GKVVGKFPRL VRDLSRDLGK EIDFSIEGED IELDRTILTE ISDPLMHILR NAVDHGIEPP 
AERERKGKSR EGSIELRARR ERDHVVISVE DDGAGLDVEA IREQARKQGI RSADELDRMD 
DSAIYDLTFH PGFSTAEEVT GTSGRGVGMD VVHETVSQLD GSVNVESEPD EGTTVSLRLP 
VTMAIVKVLF IQVGDEQYGI PIKNVDEITD AGEAREINGN EVIKHNDEIY PIIHLDEAFD 
VPGERTNGDG MLIRVRESER KVALHCDEVN SQEEVVVKPL EGLLSGTPGL SGTAVIGDGN 
IVHILDVVTL