Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_0868 |
Symbol | |
ID | 8383141 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | - |
Start bp | 835757 |
End bp | 836548 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644971932 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003129784 |
Protein GI | 257051951 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGATC AATTTGAAGA CAAGGCAGTT ATCGTCACTG GCGCGTCCTC GGGGCTCGGG CGCGCGATCG CGAAACGCTT CGGGGAAGCC GGCGCGAACG TCACGAACGC GGACATCCAG CCGGACCCCC AGACCGGGGG GACGCCGACC CACGAGGCCA TCAACGAGGC GGACAACGAC GGCGAGGCCA AGTACGTCGA GACCGACGTC TCCTCGAAGG AGGATGTCCA GGTCGCCGTC GACGCCACCG TCTCCGAGTA CGGCTCACTC GACGTGATGG TCAACAACGC CGGCGTCACC AAGATCGCCC CCGCCGAGGA GATGGACTTA GACGACTGGC GGTGGGTCAT CGACGTCAAC CTCACGGGCG TGTTCATCGG CAGCCAGATC GCGGGCCAGC AGATGCTCGA ACAGGAGGAT GGCGGGTCGA TCGTCAACAT GGCGTCGATG ATGGGCGAGA TGGGGCTCCA GAAGCGCTCG CCGTACTGCG CCGCCAAGGG CGGCGTCATC AACCTCACCC GCACCCTCGC CGTCGAGTGG GCGCCCGAAG ACATCTACGT CAACGCCCTG GCTCCCGGTT ATATCTACAC TGATATCACG GAACAGACCC AGGACTCTGC CGATTACTCC AACGAGGACA TCCGCCGACG GACGCCGGTC GGTCGCTACG GGACGCCCGA GGAGATGGCC GAGAACATCC TCTTCCTTGC TCGTGACGAT CACTTCGTCA CTGGCGAAGT TCTCCACGCC GACGGCGGCT GGAGCGCGGA CGGTTGGGGC TACCGGGAGT AA
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Protein sequence | MTDQFEDKAV IVTGASSGLG RAIAKRFGEA GANVTNADIQ PDPQTGGTPT HEAINEADND GEAKYVETDV SSKEDVQVAV DATVSEYGSL DVMVNNAGVT KIAPAEEMDL DDWRWVIDVN LTGVFIGSQI AGQQMLEQED GGSIVNMASM MGEMGLQKRS PYCAAKGGVI NLTRTLAVEW APEDIYVNAL APGYIYTDIT EQTQDSADYS NEDIRRRTPV GRYGTPEEMA ENILFLARDD HFVTGEVLHA DGGWSADGWG YRE
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