| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_0783 |
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| Symbol | |
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| ID | 8383054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | - |
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| Start bp | 764159 |
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| End bp | 765985 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644971847 |
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| Product | DNA-directed RNA polymerase subunit B' |
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| Protein accession | YP_003129701 |
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| Protein GI | 257051868 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR03670] DNA-directed RNA polymerase subunit B |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCAGG GACGCGACGC CAAAGTCTAC GTCAACGGAA GTCTCGTCGG GACCCATCCC
GAACCGAACC AGCTCGCCGA TCAGGTACGG AGAGCCCGCC GGCGCGGCGA GATCAGCGAG
ATGGTCAACG TCTCGGTGAA ACCGCGCACC GGCGAAGTCA TCATCAACGC CGACGCCGGC
CGGGCGCGCC GCCCGCTGCT GGTCGTCGAG GACGGCGAAC CATTGATCTC CGAGGAGGAG
TACGCCGCCA TCGAGAACGG CGAACTCACC TTCGAGGAGC TTGTCGAACG CGGGTTCGTC
GAGTTCATCG ACGCGGAGGA GGAAGAGGAC ATCCTCGTCG CCGTCGATAC GGACGAACTC
ACGGAGAATC ACACCCATCT CGAAGTCGAC CCGCAACTCA TCTTCGGGAT CGGTGCAGGG
ATGATCCCCT ACCCCGAGCA CAACGCCAGC CCGCGGATTA CCATGGGTTC GGGGATGATC
AAGCAGAGTC TGGGGCTCCC GAGCGCGAAC TACCGGGTAC GCCCGGACAC GCGCCAGCAC
CTGCTGCATT ACCCCCAGCT CTCGATGGTC AAAACCCAGA CCACCGAACA GATCGGGTAC
GACGACCGTC CGGCCGCCCA GAACTTCACG GTCGCCGTAA TGAGCTACGA GGGGTTCAAC
ATCGAGGACG CCCTCGTCAT GAACAAGGGG TCGGTCGAGC GTGCGCTCGC CCGCTCGCAC
TTCTTCCGGA CCTACGAGGG CGAGGAACGC CGCTACCCCG GCGGCCAGGA GGATCGCTTC
GAGATCCCCG ACGACGAGGT TCGGGGCGCA CGCGGCGAGG ACGCCTATAC GCATCTCGAC
GAGGACGGCC TGGTCAACCC CGAGACGAAG GTCGGCGAGA ACGCCGTCCT GCTCGGGAAG
ACTTCGCCGC CCCGGTTCCT CGAAGAACCG GACGACATGG GTGGGCTCTC CCCCCAGAAG
CGCCGCGAAA CGAGCGTCAC CATGCGATCG GGCGAGAGCG GGGTCGTCGA CACGGTCACC
CTGATGGAGG GCGAGGACGG TTCGAAGCTC TCGAAGGTCA AGGTCCGCGA CGAGCGGATC
CCGGAACTCG GAGACAAGTT CGCTTCCCGG CACGGCCAGA AGGGGATCGT CGGCCACATC
GCGCCCCAGG AGGACATGCC GTTCACCGAG CAAGGTGTCG TCCCGGACCT CATCATCAAT
CCGCACGCAC TTCCCTCGCG GATGACCGTC GGTCACATTC TGGAGATGAT CGGCGGGAAG
GTCGGCGCAC TCGAAGGCCG ACGGGTCGAC GGGACGGCCT TCACGGGCGA GGACGAGGAG
GACCTCCGGG ACTCCCTGGA GGACCACGGA TTCGACTCCT CGGGCAAGGA GGTCATGTAT
TCCGGCATCA CGGGCGAGAA GGTCGAGGCC GAGATCTTCG TCGGGAACAT CTTCTATCAG
AAGCTCTATC ACATGGTCTC GAACAAGATC CACGCCCGCT CGCGTGGCCC GGTCCAGGTG
CTGACCCGCC AGCCGACCGA GGGGCGTGCC CGCGAGGGTG GCCTCCGGAT CGGGGAGATG
GAACGCGACG TCTTCATCGG TCACGGGGCA GCACTCACGC TCAAGGAGCG TCTGCTCGAC
GAGTCAGACC AGGAGTGGAT CCACGTCTGT GGGCAGTGTG GCATGACCGC CGTCGAGAAC
GTCGACCAGC GCCGGGTGTA TTGCCCCAAC TGCGACGAGG AGACGGACGT CCACGAGGTC
GAGATGAGTT ACGCCTTCAA ACTCCTCTTG GACGAGATGA AGGCCCTGGG TATTGCTCCG
CGGATCGAAC TGGAGGACGC AGTCTAA
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| Protein sequence | MSQGRDAKVY VNGSLVGTHP EPNQLADQVR RARRRGEISE MVNVSVKPRT GEVIINADAG
RARRPLLVVE DGEPLISEEE YAAIENGELT FEELVERGFV EFIDAEEEED ILVAVDTDEL
TENHTHLEVD PQLIFGIGAG MIPYPEHNAS PRITMGSGMI KQSLGLPSAN YRVRPDTRQH
LLHYPQLSMV KTQTTEQIGY DDRPAAQNFT VAVMSYEGFN IEDALVMNKG SVERALARSH
FFRTYEGEER RYPGGQEDRF EIPDDEVRGA RGEDAYTHLD EDGLVNPETK VGENAVLLGK
TSPPRFLEEP DDMGGLSPQK RRETSVTMRS GESGVVDTVT LMEGEDGSKL SKVKVRDERI
PELGDKFASR HGQKGIVGHI APQEDMPFTE QGVVPDLIIN PHALPSRMTV GHILEMIGGK
VGALEGRRVD GTAFTGEDEE DLRDSLEDHG FDSSGKEVMY SGITGEKVEA EIFVGNIFYQ
KLYHMVSNKI HARSRGPVQV LTRQPTEGRA REGGLRIGEM ERDVFIGHGA ALTLKERLLD
ESDQEWIHVC GQCGMTAVEN VDQRRVYCPN CDEETDVHEV EMSYAFKLLL DEMKALGIAP
RIELEDAV
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