| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_0782 |
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| Symbol | |
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| ID | 8383053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | - |
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| Start bp | 761116 |
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| End bp | 764157 |
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| Gene Length | 3042 bp |
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| Protein Length | 1013 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644971846 |
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| Product | DNA-directed RNA polymerase subunit A' |
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| Protein accession | YP_003129700 |
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| Protein GI | 257051867 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02390] DNA-directed RNA polymerase subunit A' |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0720962 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACAG GACAATCACC CAAGTCGATC GGGCGTCTCA GCTTCGGGCT GATGAACCCC
GAGGAGTACC GGGATATGAG TGCCACGAAG GTCATCACGG CCGACACCTA CGACGACGAC
GGCTTCCCCA TCGACATGGG GCTGATGGAC CCGCGACTCG GCGTGATCGA CCCCGGACTG
GAGTGTAAGA CCTGTGGCAA ACACTCGGGC TCGTGTAACG GCCACTTCGG ACATATCGAA
CTCGCCGCTC CCGTCATCCA CGTCGGCTTC TCGAAGCTCA TCCGACGGCT CCTTCGCGGA
ACGTGTCGGG AGTGTTCGCG GTTGACAGCC GTCGACGGCT CGAAGTACAC TGATGGCGAC
GGCAACGTCG ATCTCGAAGC GGCTTCGGCC GCTGCCGAGG ACAAGAAACG CGAATTCAAG
GAGGAACTCC GGCGGGCGCG AGAACTCTCG AACGACCCTT CGGACGTCCT CAAGTCCGCG
ATCCGGCAGG CCCGCTCGGC CAGCCGGTGT CCCCACTGCG GCGAAAAGCA GTTCGACGTC
AAACACGAGA AACCGACGAC GTACTACGAG ATCATCGAGG TTCCCCACGC CGAACTCGCC
GAGCGGCTCA GCATGGCGAT GGACCCGCCG GAAGGTGAGC CAGTCACGCC CGACGAACTC
GAAGAGGCGA CTGACGGTGG GTTCGACGCC GGTCGGATCC GGGAACTCCT CTCGGACACC
TACCGCCCCG ACCGCAATGA CATCCCCGCG CTCCAGGAGA TCGGCAGCGC GCTCCATCGG
TTCAACGACC TCGAAGAGCA CCTCGGCGAC GAACTCGACA TCGAGAGTCC GTCGTCGTTC
CTCCTCGAGG AGGACATGGA CAAGCTGATG CCCAGCGACA TCCGGGACTG GTTCGAGGAG
ATCCCGGACG ACGACCTCGA GGCGATCGGG GTCAATCCTG AAACGTCCCG GCCGGAGTGG
ATGATCCTCA CCGTCCTGCC GGTGCCGCCG GTGACGGCCC GTCCCTCGAT CACGCTGGAC
AACGGCCAGC GGAGCGAGGA CGACCTGACT CACAAGCTGG TGGACATCAT CCGGATCAAC
CAGCGGTTCA TGGAGAACCG CGAGGCCGGC GCGCCACAGC TGATCATCGA GGACCTCTGG
GAACTGCTGC AGTACCACGT CACCACGTTC ATGGACAACG AGATCAGCGG GACGCCGCCG
GCCCGACACC GCTCCGGACG GCCGCTGAAG ACACTCTCCC AGCGCCTGAA GGGCAAGGAA
GGTCGCTTCC GTGGGAGCCT CTCCGGGAAG CGCGTGAACT TCTCGGCCCG GACCGTCATC
TCCCCGGACC CGACCCTTAG CCTCAACGAG GTCGGGGTGC CCGACCGGGT CGCAAGCGAG
ATGACCCAGA CGATGAACGT CAACGAGCGC AACCTCGCGG AGGCCCGCCA GTACGTGTCC
AACGGACCGG AGGCCCATCC GGGTGCGAAC TACGTCCGCC GGCCGGACGG TCGGCGGCTC
AAGGTGACCG AGAAGAACTG CGAGGAGCTC GCCGAGAAGG TCGAGCCGGG CTGGGAAGTG
GCTCGCCACC TGCTCGACGG CGACATCGTG ATCTTCAATC GCCAGCCGAG TCTCCACCGG
ATGTCCATCA TGGCCCACGA GGTCGTGGTG ATGCCCTACA AGACGTTCCG GCTGAACACC
GTCGTCTGTC CGCCGTACAA CGCTGACTTC GACGGCGACG AGATGAACAT GCACGCCCTC
CAGAACGAGG AGGCCCGTGC CGAGGCTCGC GTCCTCATGC GCGTCCAGGA ACAGATGCTC
TCGCCGCGCT TCGGCGAGAA CATCATCGGG GCGATCCAGG ACCACATCAC GTCGGTGTAC
CTGCTGACCC ACCAGAACCC CCACTTCAAC GAGACCCAGG CCCTGGACCT CCTGCGGGCG
ACGAACGTCG ACGAACTGCC GGAACCTGAT GGAGAGGAAG ATGGCCGGGC CTACTGGACG
GGTCGGTCGA TCTTCTCGGA ACTGTTGCCG GACGACCTCG ACCTCGAATT CACGAGCGAG
GCCGGCGACG ACGTCGTCAT CGAGGACGGC CAGTTGCTCG AAGGGACGAT CGACGACAGC
GCAGTCGGGG CCTTCGGCGG CGAGATCGTC GACACGATCG CGAAGGTCTA CGACAAGACG
CGGGCGCGGA TCTTCATCAA CGAGGTCTCG ACGCTCGCGG TCCGGACGAT CATGCACTTC
GGGTTCTCGA TCGGGATCGA CGACGAGTCG ATCCCGCCGG CAGCCCAGGA GCAGGTCGAG
GAGGCAATCG GCAGCGCCTA CGACCGCGTC CAGGAACTCA TCGAGACCTA CGAACAGGGC
GATCTCGAAT CGCTCCCGGG TCGGACGGTC GACGAGACCC TGGAGATGAA GATCATGCAG
ACGCTCGGCC AGGCCCGTGA CAGCGCGGGT GACATCGCCG AGGACCACTT CGCCGAGGAC
AACCCGGCAG TGGTGATGGC CGACTCCGGT GCGCGTGGGT CGATGCTCAA CCTGACCCAG
ATGGCCGGAT GTGTCGGCCA GCAGGCAGTC CGCGGCGAGC GGATCAACCG TGGCTACGAG
GACCGCACGC TCAGCCACTT CGAAGAGAAC GACCTCTCGG CGGAGGCCCA CGGCTTCGTC
GAGCACTCCT ATCGTGAGGG CCTCGGCCCG AAGGAGTTCT TCTTCCACGC GATGGGTGGC
CGCGAGGGGC TGGTCGACAC GGCAGTCCGG ACCTCCAAGT CCGGGTACCT CCAGCGTCGG
CTGATCAACG CCCTCTCCGA ACTGGAAACT CAGTACGACG GCACCGTTCG GGACACCAGC
GATACCGTCG TCCAGTTCGA GTTCGGCGAG GACGGCACCT CGCCCGTGGA TGTTTCCTCC
AACGAGGACT TCGACATCGA CGTCGAGGCG ATCACCGAGC GGATCGTCGA GGCCGAGTTC
GACGATGAAA GCGAGAAGGC GACGTTCCTC GAGCGCGAGG CGAGTCCGAC CAACCTCTCG
GAACACGCAG ACGAGTGGTG GCACGCGGAG GCCGGAGACT GA
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| Protein sequence | MSTGQSPKSI GRLSFGLMNP EEYRDMSATK VITADTYDDD GFPIDMGLMD PRLGVIDPGL
ECKTCGKHSG SCNGHFGHIE LAAPVIHVGF SKLIRRLLRG TCRECSRLTA VDGSKYTDGD
GNVDLEAASA AAEDKKREFK EELRRARELS NDPSDVLKSA IRQARSASRC PHCGEKQFDV
KHEKPTTYYE IIEVPHAELA ERLSMAMDPP EGEPVTPDEL EEATDGGFDA GRIRELLSDT
YRPDRNDIPA LQEIGSALHR FNDLEEHLGD ELDIESPSSF LLEEDMDKLM PSDIRDWFEE
IPDDDLEAIG VNPETSRPEW MILTVLPVPP VTARPSITLD NGQRSEDDLT HKLVDIIRIN
QRFMENREAG APQLIIEDLW ELLQYHVTTF MDNEISGTPP ARHRSGRPLK TLSQRLKGKE
GRFRGSLSGK RVNFSARTVI SPDPTLSLNE VGVPDRVASE MTQTMNVNER NLAEARQYVS
NGPEAHPGAN YVRRPDGRRL KVTEKNCEEL AEKVEPGWEV ARHLLDGDIV IFNRQPSLHR
MSIMAHEVVV MPYKTFRLNT VVCPPYNADF DGDEMNMHAL QNEEARAEAR VLMRVQEQML
SPRFGENIIG AIQDHITSVY LLTHQNPHFN ETQALDLLRA TNVDELPEPD GEEDGRAYWT
GRSIFSELLP DDLDLEFTSE AGDDVVIEDG QLLEGTIDDS AVGAFGGEIV DTIAKVYDKT
RARIFINEVS TLAVRTIMHF GFSIGIDDES IPPAAQEQVE EAIGSAYDRV QELIETYEQG
DLESLPGRTV DETLEMKIMQ TLGQARDSAG DIAEDHFAED NPAVVMADSG ARGSMLNLTQ
MAGCVGQQAV RGERINRGYE DRTLSHFEEN DLSAEAHGFV EHSYREGLGP KEFFFHAMGG
REGLVDTAVR TSKSGYLQRR LINALSELET QYDGTVRDTS DTVVQFEFGE DGTSPVDVSS
NEDFDIDVEA ITERIVEAEF DDESEKATFL EREASPTNLS EHADEWWHAE AGD
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