Gene Huta_0584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_0584 
Symbol 
ID8382851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand- 
Start bp584143 
End bp584829 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content61% 
IMG OID644971646 
Productendonuclease III 
Protein accessionYP_003129504 
Protein GI257051671 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.675785 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAACTT CGCTGGACTC GCGGTCAGCA CAGGCCACGG AAGTCATCGA ACGATTGCAC 
GACGCCTACC CAGATACCAC AATTTCGCTC ACCTTCTCGA ACCGACTGGA ACTGCTGGTG 
GCGGTCGTCC TTTCGGCACA GTGTACCGAC GAGCGCGTCA ACGAAACGAC GCCCGAACTC 
TTCGAGACAT ACCAGACGCC GGAAGACTAC GCCGCCGCCG ACGAGGAACA ACTCGCCGAG 
GACATCTACG GCATCACGTT TCACAACAAC AAGGCCGGCT ACCTCAAAGG GATCGGCGAG 
ATCCTCGTCG AAGAGCACGA CGGCGAGGTA CCGGATACGA TGGACGCGCT AACTGCCCTG 
CCAGGCGTCG GTCGGAAGAC CGCGAACGTC GTCCTCCAGC ACGGTCACGA CGTTGTCGAG 
GGGATCGTCG TCGATACGCA CGTCCAGCGA CTCACCCGTC GCCTGGGACT CACCGAGGAG 
GAGCGTCCCG ATGCCATCGA GGACGATCTG ATGGAGATCA TCCCTGAAGA CGAGTGGCAG 
GCGTTTACTC ATCTCATGAT CAGCCACGGT CGGGCCGTCT GCACGGCACG GAATCCGGAC 
TGTGGGGACT GTGCACTCGA AGACGTCTGT CCGTCGTCGA AACTTGACAG TGACGTGGAT 
CTCGCGAGCG GCGAGGCCTG GGAGTGA
 
Protein sequence
MGTSLDSRSA QATEVIERLH DAYPDTTISL TFSNRLELLV AVVLSAQCTD ERVNETTPEL 
FETYQTPEDY AAADEEQLAE DIYGITFHNN KAGYLKGIGE ILVEEHDGEV PDTMDALTAL 
PGVGRKTANV VLQHGHDVVE GIVVDTHVQR LTRRLGLTEE ERPDAIEDDL MEIIPEDEWQ 
AFTHLMISHG RAVCTARNPD CGDCALEDVC PSSKLDSDVD LASGEAWE