| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_0554 |
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| Symbol | |
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| ID | 8382821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | + |
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| Start bp | 560478 |
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| End bp | 561470 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644971616 |
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| Product | Transcription factor TFIIB cyclin-related |
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| Protein accession | YP_003129474 |
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| Protein GI | 257051641 |
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| COG category | [K] Transcription |
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| COG ID | [COG1405] Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.175964 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAAA CATCAACCCG GTCACGACCA ACAGAGCGAA CTAGCGAACG CAAGACTGAC
GAAAAAGTCG AGCACGAGGA AACAAAGACG GACGTCTGTC CGGAGTGCGG TGGCGGCCTG
GTAACGGATT CCGAGCGCGG CGAGACGGTG TGTGGTGAGT GTGGCCTCGT CGTCGAGGAG
GACGAGATCG ATCCTGGCCC CGAGTGGCGC GCGTTCGACG CCGCCGAGAA GGACCAGAAG
TCCCGTGTCG GTGCCCCGAC GACGAACATG ATGCACGACA AGGGACTCTC GACCAACATC
GGCTGGCAGG ACAAGGACGC CTACGGCAAC TCCCTCTCCA GCCGCCAGCG CGAGAAGATG
CAGCGGTTGC GCACCTGGAA CGAGCGCTTC CGAACCCGCG ATTCAAAGGA ACGCAATCTC
AAGCAAGCCC TCGGCGAGAT CGACCGCATG GCAAGCGCGC TTGGTCTCCC CGAAAACGTT
CGGGAGACCG CCAGCGTCAT CTATCGCCGT GCGCTGGACG AGAACCTCCT CCCCGGACGC
TCCATCGAGG GCGTCGCCAC CGCATCGCTC TATGCGGCCG CCCGCCAGGC CGGCAACCCC
CGCAGTCTCG ACGAAATCGA GCGCGTCTCC CGGATCGGCC GGATGGAACT CACGCGGACG
TATCGATACG TCGTCCGCGA ACTGAACCTG GAAGTACAGC CAGCCGATCC CGAGAGCTAC
GTCCCACGGT TCGTCTCCGA CCTCGAACTG AACGAAGAAG TATCCCGGCG AGCCCGCGAA
CTCGTCGATT CAGCCCGAAA AGAGGGGGTT CTCAGCGGGA AGAGTCCCGT CGGGATCGCC
GCCGCCGCGA TCTATGCAGC AGCCCTCTTG AGCAACGAAC GAGTGACCCA GGGTGAGATT
TCGGAGGTGG CAGACATCTC AGAGGTCACG ATCCGGAATC GCTACAAGGA ACTCCTCGAG
GCAAAATCAG TCGACGGCAC GCGAGTACAG TGA
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| Protein sequence | MSETSTRSRP TERTSERKTD EKVEHEETKT DVCPECGGGL VTDSERGETV CGECGLVVEE
DEIDPGPEWR AFDAAEKDQK SRVGAPTTNM MHDKGLSTNI GWQDKDAYGN SLSSRQREKM
QRLRTWNERF RTRDSKERNL KQALGEIDRM ASALGLPENV RETASVIYRR ALDENLLPGR
SIEGVATASL YAAARQAGNP RSLDEIERVS RIGRMELTRT YRYVVRELNL EVQPADPESY
VPRFVSDLEL NEEVSRRARE LVDSARKEGV LSGKSPVGIA AAAIYAAALL SNERVTQGEI
SEVADISEVT IRNRYKELLE AKSVDGTRVQ
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