| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_0318 |
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| Symbol | |
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| ID | 8382582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | - |
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| Start bp | 306740 |
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| End bp | 308320 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644971377 |
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| Product | phytoene desaturase |
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| Protein accession | YP_003129238 |
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| Protein GI | 257051405 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | [TIGR02734] phytoene desaturase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.158779 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGGAA ATGCAGCCGG GTCACTCGCC GGCCGGTCGG TCGACGTCAT CGGTGGCGGG
ATCGGTGGAC TCTCCGCCGC CGCCTTTCTC GCTGACGCCG GCGCGGACGT GACCGTCCTC
GAAAAGCAGC CCCGCCTTGG GGGGGCCGCG AACCTGCTCG AAACCGATGG CTTCCGCTTC
GACACTGGTC CCTCGTGGTA TCTGATGCCC GACGTCTTCG AACGCTTTTT CGATCAGTTC
GACCGCGTGC CCGAGGAGTA TTACACACTG CAGAAACTCG ACCCGCAGTA CCGTGTGTTC
TTCCGCGACA GTGAACCGGT CCCGGGTGCG GGCACGCCCT ACGACGAGGA TGTCGATGCA
CCCTGTGACT GGGTGACCGT CACCCCGGAT CGCAACCAGA TCAAGCGTAT CTTCGCCGCC
TACGAGGCGG GCGGCGGTGA GGCCTTCGAG GAGTACCTTG CGGAGGCCGA ACACACCTAC
GACGTGGGGA TGGAACACTT CGTCTACGAG GATCGATCCC GCTTTCGCGA CCTGCTCGAT
CGGGACGTCG TCGCCGCCGG TCCGGGGCTG ACGATGCTCG GATCGATGCA GGGCCACGTC
GAAAACTACT TCGACAACCC GAAACTCCAG CAACTGCTGC AGTACACGCT GGTCTTTCTC
GGCGGCTCCC CACACAACAC GCCGGCGCTG TACAACCTGA TGTCTCACGT CGATTACAAC
ATGGGGGTCT ACTACCCCGA GGGTGGGATG TACAGCCTCG TCGAGGGGCT GGCCGAACTC
GGCGAGGAAC TGGGCGTCAC GTATCGAACC GACGTCGAGG TGACGGACAT CCAGGAAACC
ATCACCGGAC TCGCCCTGCA GACGACTGCG GGTCGCCGCC GTGCCGACCG GGTCGTCGCC
AACGCACCGC CGGCTCACGT CGAGCGCGAG TTGCTCTCCC CCGGAAAGCG CGATCACGAT
CTCGACCACT GGGACGACCA GACCTACGCA CCCTCGGCGC TGCTTTGGTA CTTCGGCGTC
GAAGGCGACG TGGGCCCGCT CGAACACCAC TCGCTGGTGT TTCCCGACGA CTGGGATCCA
CACTTCGCGT CGATCTTCGA GGAACCCGGC TGGCCGGACG ATCCGGCATA TTACCTTTCG
GTCCCTTCGA TCACTGACGA CGGTGTCGCT CCCGAAGACC ACCATGCAGT GGTCGTCCTC
ATTCCGATCG CGGCGGGGCT GGAAGACAGC GACGAGCGAC GCCAGGAATA CCGGGACTGG
GTCCTCGATG ACCTCGCCAC GAACATCGGC GTCGACCTTC GGGACCGGAT CGTCACGGCG
GCATCGATGT GCGTCGACGA TTTCACCGAG CGTCTGCACT ACCCCGAGGG AACTGCCCTG
GGGCTGGCAC ACACATTGTT CCAGACCGGG CCGATGCGTC CCTCACATCG GGCAAAGCAG
GTCGACGGAC TGTATTACGT CGGTGGGTTC ACCTCGCCGG GGATCGGCGT GCCGATGACG
ATCATCAGTG GCGAACACGC CGCCGAAGCC GTCATCGAGG ACGAGCGCGA GCGTGGGATC
AAAGCGCGGT TCCTCGGTTG A
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| Protein sequence | MTGNAAGSLA GRSVDVIGGG IGGLSAAAFL ADAGADVTVL EKQPRLGGAA NLLETDGFRF
DTGPSWYLMP DVFERFFDQF DRVPEEYYTL QKLDPQYRVF FRDSEPVPGA GTPYDEDVDA
PCDWVTVTPD RNQIKRIFAA YEAGGGEAFE EYLAEAEHTY DVGMEHFVYE DRSRFRDLLD
RDVVAAGPGL TMLGSMQGHV ENYFDNPKLQ QLLQYTLVFL GGSPHNTPAL YNLMSHVDYN
MGVYYPEGGM YSLVEGLAEL GEELGVTYRT DVEVTDIQET ITGLALQTTA GRRRADRVVA
NAPPAHVERE LLSPGKRDHD LDHWDDQTYA PSALLWYFGV EGDVGPLEHH SLVFPDDWDP
HFASIFEEPG WPDDPAYYLS VPSITDDGVA PEDHHAVVVL IPIAAGLEDS DERRQEYRDW
VLDDLATNIG VDLRDRIVTA ASMCVDDFTE RLHYPEGTAL GLAHTLFQTG PMRPSHRAKQ
VDGLYYVGGF TSPGIGVPMT IISGEHAAEA VIEDERERGI KARFLG
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