Gene Huta_0228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_0228 
Symbol 
ID8382490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp223488 
End bp224219 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content67% 
IMG OID644971286 
ProducttRNA methyltransferase complex GCD14 subunit 
Protein accessionYP_003129149 
Protein GI257051316 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2519] tRNA(1-methyladenosine) methyltransferase and related methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.811474 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGTCC TTCTCGTCGG AGAGGGCCGG GAGTACCTCG TCGCCCATGG GGAGACTCTG 
GAGACTGATC TGGGTGTCCT CGAAGTCCCG GAGGACGCCG CACCTGGTGA GACGCTCGAA
ACCCACCTCG GAACCGAATT CGACGTTCGG GCGCTTCGCG GCCCGGACCT CTTCGAGCAC
TTCGAGCGGA CGGGCGCGCC GATGATGCCC CGAGACATCG GCCTGATCGT CGGTCACACC
GGTATTGCGG CCGGCGACCG CGTACTTGAC GTGGGGACCG GAACCGGCGT TCTCGCCGGC
TATCTGGGCC GGGTCGGCGC GTCAGTCGTG ACCTACGAGC AGCGCGAGGA CTTCGCTGAC
GTCGCCCGCG AAAACATGGC GCTTGCTGGT GTCGAAGATG CCGTCGACGT GCGGACCGGC
GACGCGACCG AAACCCTCGG CGAACTCGAC GATGACGCGC CGTTCGACGT CCTCACACTC
GACACGGCCG ATGCGTCGGA ACTGGTCGGG CACGCGCCCG ACCTGCTGGC CGACGGCGGG
TTCGTCGCCG TCTACTCGCC GTTCGTCGAA AGCTCGAAGG AAGTCGTCAA GACGGCCCGA
GACGTCGGTC TCTCGGAGAT CGAGACCTTA GAGACGATCC AGCGGGAGAT GGACTTCGAC
GACCGTGGGT CCCGCCCCTC GACGGCCGGG GTCGGACACA CCGGCTATCT GACGTTTGCG
CGGCTGGTAT AG
 
Protein sequence
MSVLLVGEGR EYLVAHGETL ETDLGVLEVP EDAAPGETLE THLGTEFDVR ALRGPDLFEH 
FERTGAPMMP RDIGLIVGHT GIAAGDRVLD VGTGTGVLAG YLGRVGASVV TYEQREDFAD
VARENMALAG VEDAVDVRTG DATETLGELD DDAPFDVLTL DTADASELVG HAPDLLADGG
FVAVYSPFVE SSKEVVKTAR DVGLSEIETL ETIQREMDFD DRGSRPSTAG VGHTGYLTFA
RLV