Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_0194 |
Symbol | |
ID | 8382456 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | - |
Start bp | 190836 |
End bp | 192449 |
Gene Length | 1614 bp |
Protein Length | 537 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644971252 |
Product | DNA primase |
Protein accession | YP_003129115 |
Protein GI | 257051282 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0358] DNA primase (bacterial type) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.112469 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGATT CAGCGAAATA TCTCATTCAC GCACAGATCG AAGCCAACGG GGTGGTCGAA CGGAGTGACG TCGTCGGCGC CATATTCGGC CAGACCGAAG GCCTGCTCGG CGACGAACTC GACCTCCGGA CCTTACAGGA GTCCTCGAAA GTCGGCCGCA TCGACGTCAC GATCGACGCC GAGGGCGGCC GCTCGACCGG CGAGGTGACC ATCGCGAGCG GACTCGACCG GGTCCAGACC GCGATTCTGG CAGCCTCCCT CGAAGCGATC GATCGGGTCG GCCCCTGTCG GGCAACGCTC GAAATTACCC AACTCGAAGA CGTCAGAACC GCGAAGCGGC GCGAGATCGT CGACCGTGCC GAGGAATTGC TCGCCCGCTT CGACGAGGAA GTGATGTCGA GTCACGAACT CGTCGAGGAG GTTCGTCGCC GCGCCCGCGT CGAGCGCATC ACCGAGTACA AGGGGTATCC TGCAGGTCCG AGAGTCGCCG ACGGCGATGC GATCATCGTC GTCGAGGGGC GGTCGGACGT GTTGACGCTG TTGCAGTACG GGATCAAGAA CGCTGTCGGC GTCGAGGGGA CGAACGTTCC GGATGCGATC GCCGACCTCA CCCACGATCG CACGGTGACG ACATTTCTCG ACGGCGACCG CGGGGGGGAT CTGATCCTGA AAGAACTCGC CCAGGTCGGC AGCGTCGATT ACGTCGCCTT TGCCCCGGCC GGCCGGGCGG TCGAAGACCT CTCACGGACG GACGTGACCG ACGCGCTTCG GGAGAAAGTC CCGTACGACT CGATCGCCGA CGGCGAGATC TCGCCGAGCG ATATCGCGCC CGGTCCGGAC GGGGAAACGA CGGATAGTGA AGCCGTGGAT TCGGTGCCAG CCAATGGTGA CCCCGGCGAC GGCCTCGACG ATTCACCATC GGCGTCAGCC ACCGACGATG GGTCGACAGT GGCTGGCGAG GACGAAGCCG ACGCGACTGA TGCTGAAGCG GAGACCGACG CGGTCGGTGG CGAAGACGGG GCCAACGCAG TGGCTGGCGA GGGAGCGACC GACACAGCCG CTACCGAGGG GGAAAACGAG CCATCGGATG ACGACGCCGT TGTGGCTGAC GGGGACGGGG CCAGTGCCAC CGTTTCGACA GCCGAGATCA CGACCGAAGG CGGGGAGTCT GTCCCGGTAC CTGCCAACGG CGATGTGGCC GATCAGGTAT CAGGAGCTGA CGACGGAGCG GACGAGCCGT CCGAAACTGC CGGAGATGAC AGTCCAGTGA GTCGATCCGG ACCGGACGAC GCAGAGGACG ACGGCGAGGA ATCGATCAGC ACGTCGGCGA CGCTCGACGA TCACGTCCAG ACCGTCATCG GCGAGTCTGC CGGTGCGGTG CGATTGCTGG ATGACTCCCT GGCGACCCTT TCGGAAGCCC CCGTCGAGGA AGCCTTCGAG ACGATCCGTG ACGCCGATCC CGTCCCCGGA ACGGTGGTCA TCGACGGCCC CGTGACCCAA CGGCTACTCG ATGTCGCCGC ACAGCGTGGG ATCTCCCGGA TCGTCGCCAC CGAGCGTGGT GACCTCGTCA AACAGCCTAC CTCGGTCCGC GTCACGGTCC CGGGAGCTGC CTAG
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Protein sequence | MQDSAKYLIH AQIEANGVVE RSDVVGAIFG QTEGLLGDEL DLRTLQESSK VGRIDVTIDA EGGRSTGEVT IASGLDRVQT AILAASLEAI DRVGPCRATL EITQLEDVRT AKRREIVDRA EELLARFDEE VMSSHELVEE VRRRARVERI TEYKGYPAGP RVADGDAIIV VEGRSDVLTL LQYGIKNAVG VEGTNVPDAI ADLTHDRTVT TFLDGDRGGD LILKELAQVG SVDYVAFAPA GRAVEDLSRT DVTDALREKV PYDSIADGEI SPSDIAPGPD GETTDSEAVD SVPANGDPGD GLDDSPSASA TDDGSTVAGE DEADATDAEA ETDAVGGEDG ANAVAGEGAT DTAATEGENE PSDDDAVVAD GDGASATVST AEITTEGGES VPVPANGDVA DQVSGADDGA DEPSETAGDD SPVSRSGPDD AEDDGEESIS TSATLDDHVQ TVIGESAGAV RLLDDSLATL SEAPVEEAFE TIRDADPVPG TVVIDGPVTQ RLLDVAAQRG ISRIVATERG DLVKQPTSVR VTVPGAA
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