| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_0156 |
|---|
| Symbol | |
|---|
| ID | 8382418 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | - |
|---|
| Start bp | 153216 |
|---|
| End bp | 156470 |
|---|
| Gene Length | 3255 bp |
|---|
| Protein Length | 1084 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644971214 |
|---|
| Product | alpha-L-rhamnosidase |
|---|
| Protein accession | YP_003129077 |
|---|
| Protein GI | 257051244 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACAC CGGCGGACGC GACACCGAGC CACCTCCGCG TCGAGTACGA GAAGTCGCCG
ACGAACGTCG ACCCGTCGCG TCCGCCCCGT TTCTCCTGGC GTATCGAGAC AGCACGTCGC
GGCGCGGCCC AGCGAGCCTA CCGCCTCGTC GTCGGACGCA ATCCAGACGC AGTCGCCAAC
GGCGACGGAA CGCTGTGGGA CTCCGAACGG GTCGACTCGG ATCGAGCCAC CAACGTCGTC
TACGACGGTC CCGACCTCGC AGCCGACAGG ACCTACTACT GGTCGGTGAA GGTCTGGACG
GACCGCGGCG AGACCGAGTG GGCCGAGCCC GAATCGTTTT CGACGGCGCT CCGTCCGGAA
GACTGGTCGG GCGAGTGGAT CGCCCATCAG CCCGGCGTCG GCGACACCGA CGGCTGGCGT
AGCCAGTGGC ACCGGCCCGA GGAGGACGCC GCGGAGTGGG TTCAACTCGA CCTCGGCGAA
AGCCGGCCTG TCGACGAAAT CACGCTTCAC CCGGCCGATC CGATCTCGGT CGTGCGGACC
CCCGACGATG TGGCGGTGAC GATCCACTGG TCGTCGAACC CACTCGCTGG CTTTGGCTTC
CCCGAGACTT ATCGCATCGA ACTATCCGAC GATCCCGACT TCGCCGAGAG TACGGTCGTC
GCCGAGCGGA GGATGCCGGA CCAGGGCGAA AGCACCACCG ACGGGCTCCC GACCGACCTC
GCGACGCCGC CCCAGACCCA CGACGGGCTC GACGCCGGGG GGCGGTACCT CCGCATCACG
GCGACCGACC TCTTCGAGTT CGTCCCCCCG ACGAGCCGCG ACGCGGCAGA CTCCCGCAAG
ACCGAGGGGG TCCACCCCTG GCAGTGTTTC GCCCTCGCCG GCGTCACCGT CCGGGACGGG
GAGGGGACGG ATCTGACCGG CGACGCGTCC GCCGAGGTCT CCTCGTCGGT CGAGACGGCG
ACGTGGGGCC GCGAGCATCT CCTGAACGGC CACACCGACT CGCGGCTGGC CTCAACATCG
CCACAGCTCC GCCGGGAGTT CGAGCTTGAG AAACCAGTCG AACGGGCCCG TGCGCACGTC
GCCGCCGTCG GGTACGGGGA ACTCGCGATC AACGGCGAGA AAGTCGGCGA CCGCGTGCTC
GACCCGGCCT GGACCGAGTA CGAGAAGCGG ATTCTCTACT CGACGGACGA CGTCACCGAA
CAACTGACCA AGGGTGACAA CGCCGTCGGG CTGTGGCTCG GTCGCGGCTG GTTCGCCAAA
CGCGGGGCCT ACTGGGTCGC CGACGGATCA CCGCGAGCCC GCGTCGTTCT CACGGTCGAA
TTTACGGACG GGACGACCCG CCGGATATCT ACCGACTGCG ACTGGGCGGC CCGGGAGAGC
CCGATCGTCG AAAACGACAT CTACGACGGC GAGACCTACG ATGCCCGCCG CGAGGCCGAC
GGCTGGCGAC GCCCCGGCTT CGAGGACCCG GAGTGGGACG GTGCCGAAGT CGTCGACTCC
CCGGGAGGAA CGCTCAGACC CGAGCGGATC GAACCGATGG AAATCGTCGA GACCTTCGAC
GTCGAGGACG TTCACGAGCA CCCCGACGGG CCGATCCTCG ACTTCGGCCA GAACCTTACC
GGCTGGCTCG AAATCGAAAT CGAGGACCCG GCGGCCGGCG AGGAGATTAC GCTCAAACAC
GCCGAGACGC TGACCGACGA CGGCGACCTC GCGACGGTCG ACCTCCGGAG CGCCGACGCG
ACCGACACCT ACCTCGCCCG CGGCGAGGGG AGCGAGACCT ACGAACCCCG ATTCACGTAC
CACGGGTTCC GGTACGCCCA GGTCGAGGGA TATCCGAGCG AACTCGATCC CGAGGCCGTC
ACGGCGAAGG TCGTCCACAC GGCGATGGAT CGACGCGGGG AGTTCGCCTG CTCGAATGAC
GACCTGAACC AGGTCCAGCA CAACGCCGTC TGGGGGCTGG CCGGTAATGC CCACTCGATC
CCGGAGGACT GTCCACAGCG CGACGAACGC TTCGGTTGGA CCGGTGACGC ACAGATCGCC
GCTCGGTCGC TTGCGTTCAA CTTCGACGCC GCACGCTTCC ACGAGAAGTG GGCGCGCGAT
CACGACGACG CGGCGAGCGA ACTGGGCTAC GCGCCGGACG TCATCCCAAA CAAGGCCCCG
GAGAACCCGG GCGACCCGAC GTGGACGATT ACCCGCGTCG TGATCCCCTG GCATCGCTAC
CGCCACGACG GCGACGAGCG CATTCTCGAA GAACAGTTCG AGGGCATGCG CGCCCACGTC
GAGTACTGGC TGTCGGTGAC CGAGGACGAT CTGGTTCCGG GCGCGTACGG GAAGTTCGGC
GACTGGCTGG CCTTCGAGAA CACCAACGGT CGGCGCGGGC TCCCCTACGA TCTGTTCACG
ACGGCGTTCG TCTACCAGAT CACGGATATC CTCGCGAAGA TCGCCGATGT GCTCGACAAC
GATGGCGACG CCGCTCGCTA CCGCGAGTGG GCCGATCGGC TCCCGACGGC GTTCAACGAG
GAGTTCTTCG AACCCGCGGC GGGACGCTAT CGGCCCGGGA CGCAGGCCTC CTACGCCGTG
CCGCTGTTCC TCGGGCTCGT CCCCGAGGAC CACGTCGAGA CGGTCGCGGC TGGGCTGGCC
GAGAAGGTCC GTTCCGACGG CGGGAAGCTC AAGACCGGGT TCCTGGGGAC TCGCCCACTC
ATCCAGACGC TCGCCGAGCA CGGCTACGAC GACCTGGCAT ACGAGGTCGT CAGCCAGCCC
GAACGGCCGG GCTGGGTGTA CATGGCGCGT AACGGCGCGA CCACGATGTG GGAGCGCTGG
AATTCGGACG ACAGCATCGG CTCGGGTATG AACTCGCTGA ACCACTCCCC GCTCACGCAC
GTCTCGGAAT ACTTCTACGA GGTACTGGCC GGGATCAAGA TCGGCGATCG GCCCGTGACT
GACCACGTCA CGATCGCGCC CTCGCTCGTC GAGGACCTGG AATGGGTCGA AGCCAGCTAC
GAGACCCGTA ACGGGGAGAT GGCCGTCGAC TGGGAGCGGA CCGACGGGGG CTATGACCTG
TCGGTGAGGG TGCCCTGGAA CACGTCGGCG ACCATCAGGC TCCCCGACGC GGCCGGTAGG
TCGGTGTCCG AATCGGGAGT CGATCTATCC GTCGAGACGA CTCCCACACG CGAGGGTGTC
CGATCGATCG ACTACGAGGA TGACGTGGTT GTCCTGGCTC TCGACGCCGG CGAGTTCGAT
CTCTCGGTCC GGTAA
|
|---|
| Protein sequence | MTTPADATPS HLRVEYEKSP TNVDPSRPPR FSWRIETARR GAAQRAYRLV VGRNPDAVAN
GDGTLWDSER VDSDRATNVV YDGPDLAADR TYYWSVKVWT DRGETEWAEP ESFSTALRPE
DWSGEWIAHQ PGVGDTDGWR SQWHRPEEDA AEWVQLDLGE SRPVDEITLH PADPISVVRT
PDDVAVTIHW SSNPLAGFGF PETYRIELSD DPDFAESTVV AERRMPDQGE STTDGLPTDL
ATPPQTHDGL DAGGRYLRIT ATDLFEFVPP TSRDAADSRK TEGVHPWQCF ALAGVTVRDG
EGTDLTGDAS AEVSSSVETA TWGREHLLNG HTDSRLASTS PQLRREFELE KPVERARAHV
AAVGYGELAI NGEKVGDRVL DPAWTEYEKR ILYSTDDVTE QLTKGDNAVG LWLGRGWFAK
RGAYWVADGS PRARVVLTVE FTDGTTRRIS TDCDWAARES PIVENDIYDG ETYDARREAD
GWRRPGFEDP EWDGAEVVDS PGGTLRPERI EPMEIVETFD VEDVHEHPDG PILDFGQNLT
GWLEIEIEDP AAGEEITLKH AETLTDDGDL ATVDLRSADA TDTYLARGEG SETYEPRFTY
HGFRYAQVEG YPSELDPEAV TAKVVHTAMD RRGEFACSND DLNQVQHNAV WGLAGNAHSI
PEDCPQRDER FGWTGDAQIA ARSLAFNFDA ARFHEKWARD HDDAASELGY APDVIPNKAP
ENPGDPTWTI TRVVIPWHRY RHDGDERILE EQFEGMRAHV EYWLSVTEDD LVPGAYGKFG
DWLAFENTNG RRGLPYDLFT TAFVYQITDI LAKIADVLDN DGDAARYREW ADRLPTAFNE
EFFEPAAGRY RPGTQASYAV PLFLGLVPED HVETVAAGLA EKVRSDGGKL KTGFLGTRPL
IQTLAEHGYD DLAYEVVSQP ERPGWVYMAR NGATTMWERW NSDDSIGSGM NSLNHSPLTH
VSEYFYEVLA GIKIGDRPVT DHVTIAPSLV EDLEWVEASY ETRNGEMAVD WERTDGGYDL
SVRVPWNTSA TIRLPDAAGR SVSESGVDLS VETTPTREGV RSIDYEDDVV VLALDAGEFD
LSVR
|
|---|
| |