Gene Huta_0058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_0058 
Symbol 
ID8382318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp58168 
End bp59043 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content67% 
IMG OID644971116 
Producthomoserine kinase 
Protein accessionYP_003128980 
Protein GI257051147 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0083] Homoserine kinase 
TIGRFAM ID[TIGR00191] homoserine kinase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.188045 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCACGG CCCGTGCCCC GGCGACGAGC GCCAACCTCG GGAGCGGGTT CGATGTCTTC 
GGGATCGCAC TCTCTCGTCC GGCAGACGTC GTTCGCGTCG AGCGGGCCGA TCGGACGACG
ATCGAGGTGA CTGGTGCCGG GAGCCAGTTC ATTCCGGAGG ATCCCGAGAA AAACACCGTC
GGTGCGGTCG CCGAGGCGCT TGACGCGCCA GCCCACATCC AGATCGACAA GGGGATTCGA
CCAGCGTCGG GACTGGGATC CTCAGCCGCC AGCGCCGCGG CGGCGGCGGT AGCACTGAAC
GACCTCTATG ATCGTGGAAA GTCCCGGAAA GAACTCGTCC CCATCGCGGC CAAGGGAGAG
GCTGTCGTCT CCGGGGACGC CCATGACGAC AACGTCGCAC CCGCGATCCT CGGTGGGTTC
ACGATCGCCA CGCCCGACGG CGTCACACAG ATCGATACTG ACATTTCCAT CGTCGTCACG
CTCCCGGAGA TCGTCGTCTC GACGCGGGAC GCACGCAAGG TGGTGCCGAC GGAGACCACC
GTCGAGAAAC TGGTCGAGAC AGTCGGCAAC GCGGCGACAC TGACCGCCGG GATGTACCGT
GACGACCCGG CACTCGTCGG GCGAGGCATG GAAGACGATG TCGTCACGCC CGCCCGAGCG
AAACTCATCG ACGGTTACGA CGCGGTCAGG GATGCGGCAC TCGCGGCCGG GGCGACCGGC
GTCACGATCA GCGGGGCCGG CCCAGCCGTC CTCGCCGTCA CTCGGAGCCG GGACCAGCGG
TCGGTTGCCA ACGCGATGCT CGACACGTTC GACGCACGAG GGATCGACGC CCGGGCCTAC
CAGACCCGGA TCGGTAACGG GACGCGACTT TACTGA
 
Protein sequence
MRTARAPATS ANLGSGFDVF GIALSRPADV VRVERADRTT IEVTGAGSQF IPEDPEKNTV 
GAVAEALDAP AHIQIDKGIR PASGLGSSAA SAAAAAVALN DLYDRGKSRK ELVPIAAKGE
AVVSGDAHDD NVAPAILGGF TIATPDGVTQ IDTDISIVVT LPEIVVSTRD ARKVVPTETT
VEKLVETVGN AATLTAGMYR DDPALVGRGM EDDVVTPARA KLIDGYDAVR DAALAAGATG
VTISGAGPAV LAVTRSRDQR SVANAMLDTF DARGIDARAY QTRIGNGTRL Y