| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_0035 |
|---|
| Symbol | |
|---|
| ID | 8382295 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | + |
|---|
| Start bp | 34293 |
|---|
| End bp | 35381 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644971093 |
|---|
| Product | nitrite reductase, copper-containing |
|---|
| Protein accession | YP_003128957 |
|---|
| Protein GI | 257051124 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2132] Putative multicopper oxidases |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR02376] nitrite reductase, copper-containing |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.208873 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCATCTA TCCCGGTCGC CACACGACGG CGCGTTCTCC AGGCCCTCGG AGTCGGCGGC
GCCGCGGCCC TCGCCGGCTG TGGTGCGTCG AGCGACACCG ACGACCAGCC TGCCGAGAAT
ACGTCACCCA CCGAACCTCA CATGAACGAT CCCCAGATGA CAGACGTCGA CCGTATCGCC
GCCGATCCGA CCGACGTCCC TGATCCGATC GACCGGTCCT CGCCGGCGAC AGTCAACGTC
GAACTCGAGA CGCGCGAACT CGTCGCCGAG GTCGAACCGG GCGTCACCTA CACCTACATG
ACCTTCGACA ATCAGGTTCC GGGGCCACTG ATCCGGGTCC GCAAAGGTGA CACGGTGAAT
ATGACGGTCA CCAGCCACGA GGACAACACG ATGCCCCACA ACATCGACCT CCACGCGGTC
AGGGGGCCAG GTGGCGGGGC CGAGGCGTCG ATGGTCGCCC CCGGCGAAAC CGAGACCTTC
CAGTTCAAGG CGACCTACCC CGGCGCATTC ATCTATCACT GTGCCGTCCC GAACTTGGAC
TATCACATCG CCTCGGGGAT GTACGGTCTC ATTCTCGTCG AACCCGAGGA CGGGCTTCCC
GAGGTCGATC ACGAACTCTA CTTCGGCCAG AACGAACTCT ATACCACGGG CGACGTATCC
CAGGATGGCC ACCACGACTT CGACATGGAT GCGATGACGG CCGAAGAGCC GACGTACGTG
CTCATGAACG GTGAGAGTCG CGCTATTACG GAAAATCGGT ATGGCCCGGT AACCGTCGAC
GTCGGCGACA CCGCCCGCGT GTACTTCGTC AACGGTGGTC CAAACCTCAC GTCGAGTTTC
CACCCGATCG GGTGTGTCTG GGACGAAGTC CATCCCCAGG GTGGGATCGG GGGGCCGCCC
CATCGAAACA TCCAGACGAC GCCCGTCATG CCCGGCTCGG CGACCATCGC GACGATGCAC
TTCGAGGTCC CCGGCCCGGT GAAACTCGTC GATCACGCCC TCTCGCGGGT CGCCCGGAAA
GGGCTCCTGG CCGTCGTCGA AGCCGAGGGC GACGCCCGTC CTGATCTCTT TGATCCCGAT
CCGGACTGA
|
|---|
| Protein sequence | MSSIPVATRR RVLQALGVGG AAALAGCGAS SDTDDQPAEN TSPTEPHMND PQMTDVDRIA
ADPTDVPDPI DRSSPATVNV ELETRELVAE VEPGVTYTYM TFDNQVPGPL IRVRKGDTVN
MTVTSHEDNT MPHNIDLHAV RGPGGGAEAS MVAPGETETF QFKATYPGAF IYHCAVPNLD
YHIASGMYGL ILVEPEDGLP EVDHELYFGQ NELYTTGDVS QDGHHDFDMD AMTAEEPTYV
LMNGESRAIT ENRYGPVTVD VGDTARVYFV NGGPNLTSSF HPIGCVWDEV HPQGGIGGPP
HRNIQTTPVM PGSATIATMH FEVPGPVKLV DHALSRVARK GLLAVVEAEG DARPDLFDPD
PD
|
|---|
| |