| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_0015 |
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| Symbol | |
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| ID | 8382275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | - |
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| Start bp | 16695 |
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| End bp | 18629 |
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| Gene Length | 1935 bp |
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| Protein Length | 644 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644971074 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_003128938 |
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| Protein GI | 257051105 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.529162 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGACA CTGCCGCCGG ATCGTCGGCC ACGGAACTCG CCCGGAAGCT GGGGCTCGAA
ACCCTGCTGG AGGTGCTACA GCAGAAGCGT TCGGACGCGT GTGACTGTGT GCCGGAAGAA
GCTGGCAATC AGTTACGTCT CGACGCAAGC GAGTGTGACG GTGATCTCGA GGCGTCGCCG
GACTGTCGAG AAACCGTCGT GCGTAATCTC GTTGCCGGTC CGGCTGATGA AATCCTGGTC
CAGTCGAACG GTTGTCGGCA CCGCTATCGA AACAACGCAG CCGCCCTCCT GTCGGCTGCG
GGCCGGTTTA TCAACCTCCT CGGGGATCGA GAGCGGGCCA TCGAACAGCG GGTTGTAACA
GAGCCCCTCG CGGTGGCTTC GGAACTCCGT GAACGAGTCG ATCCGATCGC GGACGTCGGC
GTCGAATCCG GACTGCTCGA AACAGCGGCG CAGATCGACA GCGTGAGCGA GGTACTCACG
CCCGAGATCG GCCTCACAAT CGGCCACTAT TTCGTCGACC AATCCGTCGA TGATGACTCC
CGACTCCAGC AAGTCATCGA CCTCGACACC GGCACTGAGG CCCGGATCTA CGCGCGTTCG
GACGCGATTC CGCGGTACGC ACTCGATATG GCCGAACTCA GGCTGTCCGA ACCGGAGCGG
GAAAGACTGC TGGATGGATA CGATCGGATT GCAAACGGCG ATATCACGGG CGAAAGAGCT
TCAACACACG CGATCCAGGC AGCGAGCGAC GGTAGCGTGG ATCCGCTGTT GACGTCGATC
CTTCGGAAGC ACACCCAGGG GTATGGCATT CTCGAGGACC TCTTTGCCGA CCCCCAGATA
ACTGACGTAT ACGTTACCGC ACCGGTCTCA CGGAATCCGC TCAGAATTCT CAGAGATGGC
GAATCGATGT CCACAAATGT ATTTTTGAGT GCCGACGGTG CGGCCGCCCT CGCGTCACGG
ATCAGGCGAA CGAGTGGCCG GGCGTTCTCG CGTGCAACGC CGACCGTGGA TGCGAAAGCG
ACCCTAGATA GTGAGACTGA CGTCCGGGTG GCCGGGGTGA CCAAACCAGT CTCCGACGGG
ATCGCGTTCG CGTTCAGACA GCAGGCCAGC GACCGGTTCA CGCTGCCGAA ACTTGTCCAG
AACGGGACAG TCACTCCGGA CGTGGCCGGG TTCCTGTCAG TGGCAGTCGA GGGCAACGCT
GCAACGCTCA TCGCCGGCAC GCGCGGGGCT GGAAAGACGA CACTCCTTGG CACATTGCTG
TATGAACTCA CAGCAGACAC GCGAACTGTC GTGATCGAGG ATACGCCGGA GTTGCCGGTC
GAATCGTTGC AGTCTGTCGG ACGGGACGTC CAGGCACTCC GAACCGGCAC CAGTCACGGG
CCGGAGGTGA CGCCCTCGGG GGCACTCCGA ACGGCGCTTC GACTCGGTGA TGGTGCCCTC
GTCGTCGGCG AGATCCGTGG TGAAGAGGCC CAGGTACTGT ACGAAGCCAT GCGGATCGGC
GCGAACGCCA ACGCCGTCCT CGGCACGATC CACGGCGACG GGGCGACGGA CGTCTACGAG
CGCGTAGTTT CAGATCTCGG TGTGGATCCG TCGTCGTTCG CCGTGACCGA TCTGGTGGTC
ACGATCCAAT CTTTGCCGAC GCCGCAGGGC CGTGATCGCC GAGTGTCACG CATCGAGGAG
GTAGTCTACG ACGGAAGTGA CGTTCGGTTC GAGCCGCTCT ACGAGAGCGA CGGCACCGCC
GCACGACCGA CCGGCCGGAT CGACCAGGGA GAGAGTCGGT TCATCCATCA GTTATCCGAT
CCCGGCGAAG CCTACGCCGA CATCCGGGAA TCGATGGCCG AGCGAGCCGA CCGTCTCGGA
CGGCTCGCGA GGGACGGCCG AACTGATCCG ACGGAGGTCG CCGGCGCGTA CGCCGGACGG
ATCCGAGCTG ACTGA
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| Protein sequence | MSDTAAGSSA TELARKLGLE TLLEVLQQKR SDACDCVPEE AGNQLRLDAS ECDGDLEASP
DCRETVVRNL VAGPADEILV QSNGCRHRYR NNAAALLSAA GRFINLLGDR ERAIEQRVVT
EPLAVASELR ERVDPIADVG VESGLLETAA QIDSVSEVLT PEIGLTIGHY FVDQSVDDDS
RLQQVIDLDT GTEARIYARS DAIPRYALDM AELRLSEPER ERLLDGYDRI ANGDITGERA
STHAIQAASD GSVDPLLTSI LRKHTQGYGI LEDLFADPQI TDVYVTAPVS RNPLRILRDG
ESMSTNVFLS ADGAAALASR IRRTSGRAFS RATPTVDAKA TLDSETDVRV AGVTKPVSDG
IAFAFRQQAS DRFTLPKLVQ NGTVTPDVAG FLSVAVEGNA ATLIAGTRGA GKTTLLGTLL
YELTADTRTV VIEDTPELPV ESLQSVGRDV QALRTGTSHG PEVTPSGALR TALRLGDGAL
VVGEIRGEEA QVLYEAMRIG ANANAVLGTI HGDGATDVYE RVVSDLGVDP SSFAVTDLVV
TIQSLPTPQG RDRRVSRIEE VVYDGSDVRF EPLYESDGTA ARPTGRIDQG ESRFIHQLSD
PGEAYADIRE SMAERADRLG RLARDGRTDP TEVAGAYAGR IRAD
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