| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_0014 |
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| Symbol | |
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| ID | 8382274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | - |
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| Start bp | 14989 |
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| End bp | 16695 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644971073 |
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| Product | type II secretion system protein |
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| Protein accession | YP_003128937 |
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| Protein GI | 257051104 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.198638 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGATTG GATCGACGAT CCTGGGTGGG CTTGCTCGGT TGTATCCGTT CGAGGTCGAG
GCAAGTGACG CCCTCGCAGA TTCAGTGACG TTTCTCGATG TGAGTTACGA GCCCGAAACC
TACGTCAGCG CCGGTTTCGG TGGCGGGATC GTCGGTGGGT TCCTCCCGGT CATGCTCACA
GCGTGGCTAC CATGGTACGT CGTTGTCGTC ACCTCGCTGA GTTGCTCGCT GGCGTCCATC
CACGGGATTC AGTCACTCCC GCACGTGCAG GCGGCGTTCA AGCGAACCGA AGCGCTCGGC
GACGCACCGA ACTTGATCGG GCGAGCAGTC CTGCGAATGC AGATCGAGCC CGCGACCGAA
TCAGCCGTCA GATTCGCCGC CGATACCGGA TCGAGTTCAC TCGCGGCGAA TCTGTCGACG
CACATCGATG CTGCCGTCGG CACACCACGA ACCGGGCTGT TGTCCTTCGC CGAGGAATGG
TCCGACCGGT TTCCGGCGAT GCAGCGGTCA GCGTACTTGC TTGCGAGTGC ACAGCAGGCA
CCAGCCGGTG AACGTGCCCG AACGCTGGAT CGATCGCTTG GGGCCGTTCT CGATGGAACG
CGAGATCGGA TGGCCGAGTT CACGAACGCC ATTCGCGGGC CGACGACGAT CCTGTACGCG
TTTGGGGTGA TGATCCCGCT GGCGCTTGTC GCGCTTCTCC CGGCGCTTGG GTTCGTTGGC
TACGAGATCA GTATCTGGTA TCTCGTCGTC GGGTACGACA TCGTCTTGCC GATCACACTG
ACCGGGGCGT GCCTCTGGTT GCTCGTCCGT CGACCGATCG CGTTTCCCCC ACCGAAGGTG
ACCCGGTCCC ATCCGGACGT CCCATCGCGG TTTCTTCCCA CGCTGCTGTG GGGGGCTATC
GGCGTCCTCG CGGGGTTTTC ACTCGTGAAC GTCCTGGGAG TCGCGCATCT GGCACCGGTG
GCCTCGGCTG GACTTGGCAC TGGTGCCATG TTGATTGCGT ACGTCCGCCC GATCCTCCAC
GTTCGAACGT ACATCCGTGA CGTCGAGTCG AATCTCACCG ACGCGCTGTA CCTCACCGGG
CGACTTGTCG ACGACGGGAA ATCCGTCGAA ACGGCGATCC AGCGGGCTGG CGATCAGGTT
CCGGCCGCGA CCGGGGAATT GCTCGAACAA GCAGCCGGAC TTCAGCGCCG GCTGCACCTG
AGCGTGCACG ACGCGTTCCT CGGGGAGTAC GGTGTTGTCA GCGACGTTCC AAGTCCACGA
GTCCGAGCCA CGGTCGAGTT ACTCGCGATC GCAGCCGAAC AGGGCGCACC GGCCGGACGC
GCGATCGTCT CGATGGCCGA CCACCTCGAC GAACTCCGGG ACGTCGAGGC ACGGACGAGA
CGACAGCTCT CGACGATCAC CGAAACGATC GACCACACGG CAACCTTCTT CGGCCCGATG
GTTGCGGGGG CAACTGTCGG GCTCGCCGGA GGTCTGTCCG GCGATGGGAC GACAGCGATC
GAGGGCGCAA CGACGTTACC GACCGACCAG CTCGGACTCG TGATCGGGGC GTACGTCGTC
TCGCTGTCGT TCATCCTGGT ACCGCTCTCG GTCGCGCTCG AGGACGGACT CGACAGACCA
CTCATCGGCT ATCGGATCGG TCGGTCACTG GTCGGAGCCG TCACGATCTA CGTGCTCACC
GTGGTCGCCG TCGGCCTGAC GTTCTGA
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| Protein sequence | MSIGSTILGG LARLYPFEVE ASDALADSVT FLDVSYEPET YVSAGFGGGI VGGFLPVMLT
AWLPWYVVVV TSLSCSLASI HGIQSLPHVQ AAFKRTEALG DAPNLIGRAV LRMQIEPATE
SAVRFAADTG SSSLAANLST HIDAAVGTPR TGLLSFAEEW SDRFPAMQRS AYLLASAQQA
PAGERARTLD RSLGAVLDGT RDRMAEFTNA IRGPTTILYA FGVMIPLALV ALLPALGFVG
YEISIWYLVV GYDIVLPITL TGACLWLLVR RPIAFPPPKV TRSHPDVPSR FLPTLLWGAI
GVLAGFSLVN VLGVAHLAPV ASAGLGTGAM LIAYVRPILH VRTYIRDVES NLTDALYLTG
RLVDDGKSVE TAIQRAGDQV PAATGELLEQ AAGLQRRLHL SVHDAFLGEY GVVSDVPSPR
VRATVELLAI AAEQGAPAGR AIVSMADHLD ELRDVEARTR RQLSTITETI DHTATFFGPM
VAGATVGLAG GLSGDGTTAI EGATTLPTDQ LGLVIGAYVV SLSFILVPLS VALEDGLDRP
LIGYRIGRSL VGAVTIYVLT VVAVGLTF
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