Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Htur_5287 |
Symbol | |
ID | 8745934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haloterrigena turkmenica DSM 5511 |
Kingdom | Archaea |
Replicon accession | NC_013749 |
Strand | + |
Start bp | 15190 |
End bp | 15813 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 646515740 |
Product | integrase family protein |
Protein accession | YP_003406687 |
Protein GI | 284176412 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 159 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAGCGG ACACCACCGA CGGTGCAAAC CCCGACGTTC ACTCACGGAC CTGGCTGAAA CCCGCCCAGG TCGAACGAAT GAAAGACGCC TGTCTCACTG AGGAGTTCCC CACCTACCTA CAGGATCGAA ACCTCGCGAT TGTCTCACTC CTCTACGACA CCGGGCTTCG AGCAAGCGAG CTCGTCTCGC TCGATACCCG CCACCTGGAA CTTGAGGACT CCCGGCTCTT GCTCCCCGGC AGTATCCAGA AAGGAAACGC GTCGTCAGCC TCGCTCGAAT TAGGGAAGTG GGGCGCGGAT TCGACACGAG ACCTGCGTAG GTACCTCCGA GACCGCTGGA AGGACACCGA CGCGTTATTC CCTTCGCGAT CGAGCGACCG GCTCTCACGC CGCTCTCTGC AGCGTCTCAT CGGCCGCGTC GCAGAGGTGG CCGACGTCGA GCCGTACACC GAGGACTTTG AACAGGTGGA TCCGAGCCAC GTCCACCCGC ATACGCTTCG ACATTCCGTT GCCTATCGGA TCATCGTCGA GGAAGAAGGA CGGCTTGAGG ACGTGCAAAT GCGACTACGT CACGCGAACA GATCAACGAC GGACCGGATT TACTCCCACT ACGTCGTGAG ATGA
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Protein sequence | MPADTTDGAN PDVHSRTWLK PAQVERMKDA CLTEEFPTYL QDRNLAIVSL LYDTGLRASE LVSLDTRHLE LEDSRLLLPG SIQKGNASSA SLELGKWGAD STRDLRRYLR DRWKDTDALF PSRSSDRLSR RSLQRLIGRV AEVADVEPYT EDFEQVDPSH VHPHTLRHSV AYRIIVEEEG RLEDVQMRLR HANRSTTDRI YSHYVVR
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