| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_5275 |
|---|
| Symbol | |
|---|
| ID | 8745923 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013749 |
|---|
| Strand | - |
|---|
| Start bp | 6990 |
|---|
| End bp | 10847 |
|---|
| Gene Length | 3858 bp |
|---|
| Protein Length | 1285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 646515729 |
|---|
| Product | phage/plasmid primase, P4 family |
|---|
| Protein accession | YP_003406676 |
|---|
| Protein GI | 284176401 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3378] Predicted ATPase |
|---|
| TIGRFAM ID | [TIGR01613] phage/plasmid primase, P4 family, C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 69 |
|---|
| Plasmid unclonability p-value | 0.413265 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGATC TATCGCCGTC CGAAGTCCGA GACCACTACC GTAAAGCGAG CAGCGTGTTC
GACAAGCTCG GTGACGTAGC GAACAACCCG ACGTTGGTCA AGAACGACCA CTACGGTTGG
TACATCAAGC GCGACAACGA CAACGTCGAC GAACTCGAGG AAGGGTGGAC ACAACGCGGC
CGCGTCGCGA CGGCCGACGA CTACCCGGAG ATCGTCGACC GAATCTCTCG GTCACTGTAC
GCTATCACGA CGTACAAGAA ACCCGACGCG GTGGCCCGAG AACGCCCCTG CAGGTACAAC
AGCGACGACG GGGTGACCGA ATGGATGGGC GACGAAACGC CGATGCCCGA ATGGGGAGAC
GTTGTCGCAC TCCCCGCATG GGGAGATATC GATCTCGCCG ATGAACTGAA AGGTGAGCGC
GAGACGCTTT CTGCCGAGAA GCGCGAGACG GTAGAACGGA CACTCGACGC CTATATTGGA
GAGTTCGCGG CGCTGTACGG TGGGAACCGC GACGCTATCA TGGCGCTGGA TTCCGTCGGT
GGTGCGTACA TCTTTGGCCC GCCTGAAGCG ACGATCCCGA TAGCGCGGCT GTTCAAAGAT
GACGAGAACG CGTCTGCACG CGTTTTTGAG GAGTTGAACG ACCGGATCAA CGACTACCTT
CGCGAAGCGG AACAGCGCGT GAACGACCGC GTCACTGGAG CTAGTGACGT GATTACCCCC
GATTGGGTGA ACAACGCGAA CCGAGCGTAC AAGGCACCGC TTTCGATTCA CTCGAGCCAC
GACGCGGTGG TAACGCCGAT CGACACCGAG AACGTCGAGT ACACGTACAC GCCGATCGAC
GCCGTCGGGG AGACGACGAT CTCGACGGCC GTCGAATGGG CCGAACAGTA CACGGCGGTC
GAGTACACCG AGCTGGCAGC GGAACTCGTC GAGACACTCT GGCCGGATCT TTACGACGAA
CAGTCCAATG CCACTTGGAA AGATGTGCTT GAGTTTTGGG TTGAAAAGGA ACGCGAACGC
GAGAAAGCGG AACAGCGCCG ACGCGAAAAA GCCGAGCGCG AACGCGCAAA GCGCCTGCAG
GAACTCGAGA CCACCGTCAC CGGGCAAGAC GTAACGCCGC ACAAAACGGA CGTGTACGCT
GCGCTCGACA ACGTGGACAC CGCCGAGATC GTTCGCCACT ACGCGTGTGA CGCGTGGGGC
ACCGGCGACA GTACCGGTTC GAATAAGACT GAGTTCAACC CGTCGTGGCG ACAGAGTACG
TCGGGGAGTT CCTGTTACGT CGACCACAGT TCGAACACCT TCGGAGATCC GGGCGACGGC
GGCGGTGGCT ACGCCGCGAA AGCAATGGCA CTCGGAGAGG GAATCATCAC CGACGCGAGC
GCCGATATCC GCGGCGAGAA ATGGGCGAAA GCCGTCGACG CGCTCCGATC AAAGGCCGGC
GAGAACATTC CGGTCTGGAT ACCCGGCAAA GGGTCGCTAA AGGCCGATGG CGGGGAGTAC
GAGCAAACGC CACATTGGGC CGTCGTCAAA GCGGCCGTGA CGCTCGACGT GTGCGACCCG
GCCAATCTCG AGGAACGCGA ATCCGACGAC GGCGGGACGT ATACCGGTCT CCCCGACAAA
GAGACGTACA ACGCGACGCT CGACGCACTC GAGGAACACG GCGTCGAGCA CGCCCGCGAG
CGGTACGTCA CGGAAAAGCG CGTGAACGCC GGCGCCGTCA CCTGGGGGCA AATCCGAGAC
CTATACTCGG ACCCGGAAAC GCCGGACAAG TTCGCTCGCC ACGCGGCCGT AATCAAGCTC
TGCAAAGAGA ACGAATACGT CACGACGCGG GATACCGAGG AGATATACAC CTACTACGAC
CCCGACGGTG TGTTTGAACG CGGCGGCGAG CGAGACATAG ACCACACCAT ACAGCGCGAA
CTCGGGCCGC ACTACTCGCA GCACGAAAAG CGCGAGATCC TGGGTCATAT CCGAGCGCGA
ACGTACGTCG ACCGCGAGGA GTTCAATGCG GAGGAGATCG ACGCCGATCT TGTCTGTCTC
GGGAACGGTG TGTACGACTT CGACGCCGGC AAACTCCGCG AGCACGACCC GAAGTACCTC
TTTACGCAGT CGATTCCATG GGACTATCCA GAGAATCCGG AGAGCGCCGA GTGCCCGGCG
ATAGAGGAGT TCATGGACGA CATCACACAG CGCGAAGCGG ACAAGCTCAC GATGTACGAG
TTCATCGGCC ACGCGCTGTT GCCCCACTAC GATTACAAGG CGTTCATGGT GCTGTTTGGC
CCCGGTGACA ACGGGAAAAC GACGTTCTAC AACGTCGTCG AACAGCTACT CGGCGGCCAG
TCGAATATCA GTGCGGCCGA AATGGCCGAG ATCGCCGAGA ACCGGTTCCG AGCGGAGACG
GTTATCGGGA ACTACGCGAA CATCGCCGCC GAAATGAACG CCCGTAAAAT CGACGACATG
GGCATGATAA AGAAAATGAC CGGCGGTGAC ACGTTCCAAG TGGAACCGAA GGGAAAGCCG
GCGTACGAGG TCCAAAACAC CGCGACCATG ATGTTCGGGT GCAACGAACC GCCGGTTCTC
CCCGAGCGCG GTCGCAAAAT CGCAACACGG CTGTATCCCA TCGAACTACC GTACGAGTTC
AAGAACGATC CGAGCCCGAA CAACCCGTTC GAAAAGCAGG GCCGTCCGCA AAGCGAGCTG
CTTGCGGAGA TCACGACGGA AAGCGAGCTG CAGGGGCTCC TCGTGAAAGC TATCGAAGGG
GCACACCGAT TGATCGATCG GAACGGCGAG TTCTCGCTAC CGGAGACCGC CGAAGAACGA
ATGGAGCTGT ACGAACAACA CTCGGACCCG ATCAAACAGT TCTCGGTCAA GTGCCTCGAG
AACGAATCCG GTAAGCGCGT CGCCAAAGAC GACGTGTACA ACGTCTATGT CGAGTTCTGT
CGCGAGACCG ACGCGAAGGT AACGAGTAAG AGCGTGTTCT TCAAGAAGCT TAGACAGACC
ACGTTCTCCT ACTCCGAGAC CCGTCCGCGA GCGGACGGCG ACGGGGAGCG GAAATTGTAT
CTCGACAACG CGACGTTCGC CGATCAAGCG GCCCGCTACA CTGATGAGGT GCTGTTCGAA
TACGCCGAGA CCGACACCGA CACGGACGAA GGTTCGTCAG AACCACTCGC CGTAACGGAC
CTCGAGCCTG GGATGCACCA AGAGCCGGTG CGAGCGGTCG TCGCGGAGAA ACTCGACGCC
CCCGACTGGT TAGAAGGGAA AGGCCACATC GTCGACGGCG AGGGTGCTAT CATGCCCTAC
GTAATCGAGG GTGGGGATAT ATTTGCCAGC GTGGATGAAG GCGACGAGTT GGTGATTAGA
AACGTCAAGG TGGAGGAGCA GAACGGCGTC TCGACGGCCG TACTCTCCAC TATAACGGAA
GTGGAGACAG CGAGCCGCGA GGAGAACCAA GACCCCCTCC CCTCCGACGG CGATAAGAAA
AAGACCGCGG CCGACGGCAG CGGCGCCTAC CCTGAAGCCG ACGAGACCGC CGAGACCGCC
GAGAGAGACG ATTCAGATTC AGACCCGGCC GAACACACTC GCGACGGCGA CGACGCCGAC
ACGGGCAGCG ACGCGGGCGG ACAGGCGCTA ACGACGACGG AACTCCCCCC GGAAGACGCG
ACCGGACCAC TCCCGAACGC GCGCCGTCTC CGTTTGATAC TCGAGGAGAA CGGCGACCGT
CTCTCTAAGT CCGACCTATA CGGCCGCGCT GCAGACCGGT TCGATATGTC GCCGGGCAAC
GCCGAGACCG CGGTAAAGAA GGGATGCCAT CACGGGATTC TCCGGGACGC TGGAGGGGGT
GAGATCGAGA AAGTGTGA
|
|---|
| Protein sequence | MSDLSPSEVR DHYRKASSVF DKLGDVANNP TLVKNDHYGW YIKRDNDNVD ELEEGWTQRG
RVATADDYPE IVDRISRSLY AITTYKKPDA VARERPCRYN SDDGVTEWMG DETPMPEWGD
VVALPAWGDI DLADELKGER ETLSAEKRET VERTLDAYIG EFAALYGGNR DAIMALDSVG
GAYIFGPPEA TIPIARLFKD DENASARVFE ELNDRINDYL REAEQRVNDR VTGASDVITP
DWVNNANRAY KAPLSIHSSH DAVVTPIDTE NVEYTYTPID AVGETTISTA VEWAEQYTAV
EYTELAAELV ETLWPDLYDE QSNATWKDVL EFWVEKERER EKAEQRRREK AERERAKRLQ
ELETTVTGQD VTPHKTDVYA ALDNVDTAEI VRHYACDAWG TGDSTGSNKT EFNPSWRQST
SGSSCYVDHS SNTFGDPGDG GGGYAAKAMA LGEGIITDAS ADIRGEKWAK AVDALRSKAG
ENIPVWIPGK GSLKADGGEY EQTPHWAVVK AAVTLDVCDP ANLEERESDD GGTYTGLPDK
ETYNATLDAL EEHGVEHARE RYVTEKRVNA GAVTWGQIRD LYSDPETPDK FARHAAVIKL
CKENEYVTTR DTEEIYTYYD PDGVFERGGE RDIDHTIQRE LGPHYSQHEK REILGHIRAR
TYVDREEFNA EEIDADLVCL GNGVYDFDAG KLREHDPKYL FTQSIPWDYP ENPESAECPA
IEEFMDDITQ READKLTMYE FIGHALLPHY DYKAFMVLFG PGDNGKTTFY NVVEQLLGGQ
SNISAAEMAE IAENRFRAET VIGNYANIAA EMNARKIDDM GMIKKMTGGD TFQVEPKGKP
AYEVQNTATM MFGCNEPPVL PERGRKIATR LYPIELPYEF KNDPSPNNPF EKQGRPQSEL
LAEITTESEL QGLLVKAIEG AHRLIDRNGE FSLPETAEER MELYEQHSDP IKQFSVKCLE
NESGKRVAKD DVYNVYVEFC RETDAKVTSK SVFFKKLRQT TFSYSETRPR ADGDGERKLY
LDNATFADQA ARYTDEVLFE YAETDTDTDE GSSEPLAVTD LEPGMHQEPV RAVVAEKLDA
PDWLEGKGHI VDGEGAIMPY VIEGGDIFAS VDEGDELVIR NVKVEEQNGV STAVLSTITE
VETASREENQ DPLPSDGDKK KTAADGSGAY PEADETAETA ERDDSDSDPA EHTRDGDDAD
TGSDAGGQAL TTTELPPEDA TGPLPNARRL RLILEENGDR LSKSDLYGRA ADRFDMSPGN
AETAVKKGCH HGILRDAGGG EIEKV
|
|---|
| |