Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Htur_4784 |
Symbol | |
ID | 8745374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haloterrigena turkmenica DSM 5511 |
Kingdom | Archaea |
Replicon accession | NC_013745 |
Strand | - |
Start bp | 400704 |
End bp | 401477 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 646515282 |
Product | transcriptional regulator, IclR family |
Protein accession | YP_003406229 |
Protein GI | 284172847 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.820047 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAAACG CCCCCAACGA ACGCACCGGA CGCCGGATCC AATCAGTCGA AATCGCCTTT ACCGTTCTCG ATGCCGTCCG GAAGAACGAC CGGCCCAGCG TGACCGAACT CGCCGACGAA CTCGGCCACT CGAAGAGCAC GATCCACAGC CACCTCCAGA CCCTCGAGAG CGAGGAGATC ATCGTCCGCG AGGACGACGG CTACCGGCTG AGTCTCCAGG TGCTGGACAT GGCAAACGAC GTCCGCACTC AGGTCGCCAA CTACGACGTG ATCGTCGACG CGGTCGACGA ACTGGCGAAC GAAACGGGAG AGATCGCGCA GTTCGGGATC GAAGAACACG GGCACGTGTC GTATCTCTAC AAGGCGATGG GGAATCAGGC CGTCGAGACG GCCTCGCGCG CCGGCGGGAA ACAGCCGATG TACTCGACCT CGCTCGGCAA GGCCATCCTC GCGTTTCTCC CCTCCGACAG ACAGGAGGAA CTCGTCAGCG AGGCGGCGTT CGAACGGAGA GGGCCGAAAA CGATCACGGA TCGGGCCGGC CTCTACGAGG AACTCGAGGC GACCGCGAAA CGGGGGTACG CGATCGACGA CGAGGAGAAC ATCGAGGGAC TCCGGTGTGT CGCCGCGCCC ATTCGGAACG GGACGTCGGT CGTCGGCGCC GTCAGCGTCA CCGGACCGGC CAGTCGGTTC ACGGACGACT ACCTCCACGG CGAACTCGCC GAGAGCGTCC AGCGGGCGGC GAACGTCATC GAACTCAATA CCAAGTTCTC GTAG
|
Protein sequence | MANAPNERTG RRIQSVEIAF TVLDAVRKND RPSVTELADE LGHSKSTIHS HLQTLESEEI IVREDDGYRL SLQVLDMAND VRTQVANYDV IVDAVDELAN ETGEIAQFGI EEHGHVSYLY KAMGNQAVET ASRAGGKQPM YSTSLGKAIL AFLPSDRQEE LVSEAAFERR GPKTITDRAG LYEELEATAK RGYAIDDEEN IEGLRCVAAP IRNGTSVVGA VSVTGPASRF TDDYLHGELA ESVQRAANVI ELNTKFS
|
| |