| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_4456 |
|---|
| Symbol | |
|---|
| ID | 8745085 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013745 |
|---|
| Strand | - |
|---|
| Start bp | 41078 |
|---|
| End bp | 42265 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 646514993 |
|---|
| Product | Altronate dehydratase |
|---|
| Protein accession | YP_003405940 |
|---|
| Protein GI | 284172558 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2721] Altronate dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0000308674 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACGT TTTCCGGGTA CAGACGTGAG GACGGGCGGA TCGGCGTCCG CAATCGAGTC
GCCGTCCTGC CGACGTCGGT CGCGGCGAGC GCGGTCGCCG ATCGGATCGC GGCCAACGGC
GGACCGCGCG TGACGGCGAC GCCCCACCAG ATGGGGACCG AGCAGCCTGA GCCGGCCCGC
AGACGCACCG AACGAGTTCT CGCCGGGATC GGCCGCAATC CGAACGTCGG CGGCGCGCTC
GTGGTCGAAC TGGGAACCGA GGGCGCCGAC GCGTCGGCGA TTGCCGACGA GATCGCAGCG
GCCGACACGC CGGTCGAGAC GCTGTCTATC CGCGACGCCG GCGGCACGCG TGCGACCGTC
GACCGCGGCC GCGAGACCGT CGATGCGCTC CTCGAGGAGG CGGCGCGCGC TCGCCTCGAG
ACCGCGGACG CGAGCGAGCT CGTCTTCGGC GTCGAGTGCG GCGGCAGCGA CGCCACGAGC
GGGATCGCGG CCAACCCCGC GGTGGGGAAC GCCTGCGACC GGCTCGTCGA GGCCGGCGGA
ACGAGCTGCT TCAGCGAGAC GCCGGAGTTC ATCGGTGCCG AGCACATCCT CGCGGAGCGC
TGCGTCGATG AGTCGGTCCG CGAGCGACTC ATAGAGTGCG TCGAGAGACG CGAGTCCGTC
GCCGACCTGA TGGGCGTCGA CCTCAGGGGA ACCCAGCCGA CGCCGGGCAA TCAGGAGGGC
GGACTGACGA CAATCGAGGA GAAGAGCCTG GGCGCCATCG CGAAGGGCGG CACGACGCCG
ATTCGCGACG TCATCGACTA CGCCGACCCG CTGCCGATCG GCGGCGGACT GGTCGTGATG
GACACGCCCG GCTACGACGT CGAGAGCGTC GTCGGCAAGG TCGCCGGCGG CGCGCAGGTG
ATCGCCTTCA CCACCGGCCG CGGCAGCACG ACCGGGAACC CGATCGCACC GGTGATCAAG
GTCACCGGCA ATCCCCAGAC GGCCGAGCGC ATGGCGACCA ACATGGACGT CGACGCCAGC
ACGGTTCTGG ACGGCGAGTC GGTCGAGGCC GTCGGCGAGC GCGTCTACGA GACGCTGCTG
TCGGTCGCCG ACGGCACCAG AACCGAGGCC GAGCGTCGCG GGATGGCCGA GTTCGCGATC
AACGAACTCC AGCCGCGAGA GCTGGCATCG CTGGGTGATC CGACGTGA
|
|---|
| Protein sequence | METFSGYRRE DGRIGVRNRV AVLPTSVAAS AVADRIAANG GPRVTATPHQ MGTEQPEPAR
RRTERVLAGI GRNPNVGGAL VVELGTEGAD ASAIADEIAA ADTPVETLSI RDAGGTRATV
DRGRETVDAL LEEAARARLE TADASELVFG VECGGSDATS GIAANPAVGN ACDRLVEAGG
TSCFSETPEF IGAEHILAER CVDESVRERL IECVERRESV ADLMGVDLRG TQPTPGNQEG
GLTTIEEKSL GAIAKGGTTP IRDVIDYADP LPIGGGLVVM DTPGYDVESV VGKVAGGAQV
IAFTTGRGST TGNPIAPVIK VTGNPQTAER MATNMDVDAS TVLDGESVEA VGERVYETLL
SVADGTRTEA ERRGMAEFAI NELQPRELAS LGDPT
|
|---|
| |