Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Htur_4439 |
Symbol | |
ID | 8745068 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haloterrigena turkmenica DSM 5511 |
Kingdom | Archaea |
Replicon accession | NC_013745 |
Strand | + |
Start bp | 19803 |
End bp | 20525 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 646514976 |
Product | protein of unknown function DUF1037 |
Protein accession | YP_003405923 |
Protein GI | 284172541 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4813] Trehalose utilization protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0057675 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACTAC AGGTCACGGT CTGGAACGAG AACGTCCACG AACTCGAGGA ACCCGAGGTC GCCGAACGGT ATCCCGACGG CATTCACGGG GCCATCGCGG ACGCGGTGGA CGGCGACGAC CGCACCGTCC GGACGGCCAC GCTGCAGGAA CCGGAACACG GCCTGACCGA GGAGGTCCTC ACGAACACCG ACGTTCTGCT CTGGTGGTCA CACTGCGCCA ACGACGAAGT GTCCGACGAG GTCGCCGACC GCGTCGTCGA CCGCGTCCAC GAGGGGATGG GCTTCATCCC GGTCCACTCC GGGAAGAACT CCAAGCCGTT CAAACGGCTG ATGGGGACGA CCTGTAACAT CAAGTACCGC CACGGCGGCG AGACCGAACG GATCTGGGCC GCCGATCCCG GCCATCCGAT CGTCGACGGC CTCGAGGAGT CGTTCGAGGT CCCCTCGACG GAGATGTACG GCGAACCCTT CGACATCCCG GAACCCGACC GGACCGTCTT CATCTCGTGG TTCGAGGGCG GCGAGGTGTT CCGCTCGGGC GTCTGTTATC GCCGCGGCCG CGGGCGGATC TTCGCGTTCC GGCCCGGCCA CGAGGAGTAC CCGATCTTCT TCCAGGACGA GATTCGGACG GTGCTCGACA ACGCCGTCGC CTGGGCGGCG CCGACGGAGG GGGCCGACGC CGTCTGGGGC GAGGTCGAAC CGAAGGAACC GCTGGACGAC TAG
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Protein sequence | MALQVTVWNE NVHELEEPEV AERYPDGIHG AIADAVDGDD RTVRTATLQE PEHGLTEEVL TNTDVLLWWS HCANDEVSDE VADRVVDRVH EGMGFIPVHS GKNSKPFKRL MGTTCNIKYR HGGETERIWA ADPGHPIVDG LEESFEVPST EMYGEPFDIP EPDRTVFISW FEGGEVFRSG VCYRRGRGRI FAFRPGHEEY PIFFQDEIRT VLDNAVAWAA PTEGADAVWG EVEPKEPLDD
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