Gene Htur_4407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_4407 
Symbol 
ID8745035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013744 
Strand
Start bp680053 
End bp681183 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content65% 
IMG OID646514944 
Producttransport system permease protein 
Protein accessionYP_003405891 
Protein GI284167613 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.257397 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGGGG AAAAGTCGAC CGTCGGAACG GAACGGACCG CGAGCTCGCG ACTACCGAAG 
TCACGGGTCG GGTGGCTTCT GGATCCGAAA CTCGTCACGG TGGTGCTCAC CAGCGTCGCC
ATCGTCTTCG CCGGCGCGCT GATACAGATC AGTTACGGCG CCTACTCGAT GACGTTTCTC
GAGGCGTGGC GCGCGCTGTT CAATCCGAAC GTGGTGTTCA ACCCGCAGGC CTGGGACGCG
TTCTTGCTGG GCGAAGCGAT GCCCGAGATG AGTTCCGAGA GCCTCATCGT CTGGAACATC
CGACTGCCGC GGGTCTTCGT CGCGGCGCTC GTCGGCATGA ACCTCGGCGT CTCGGGAGCG
ATCTTTCAGG CGGTGACGCG CAACGAACTC GCGAGCCCGT TCATTCTGGG CGTCTCCTCC
GGTGCCGGGC TCATGATTCT ATTGACGCTC GTCGTCTTCG GGAGCCTGAC GGCGTTTCTC
CCGATAATCG CCGCAGTGGG AGGTGCCGTC GCGTTTCTCA TCGTCTACGT GATCGCCTGG
AAGAACGGGA CCTCGCCGGT TCGGCTGGTC CTCGCCGGCG TCATCGTCGG GACGGTCTTC
GGGTCGCTAC AGACGGGACT GTTCTTCTTC GCGGACGATA TCGGCGTCGT CCAGTCGGCC
ATCGCGTGGA CCACCGGCTC GCTCACTGGG ACCGACTGGG AGCAGGTGCG ACTCATCCTC
CCGTCGACGG CCGTCGTGGT GCTGTTCGCC GTCGCCGGCT CGCGCCAGAT GGACGTCCTC
CTGTTGGGCG AACGGACCGC GCAGTCGCTC GGCATGTCGA TCGAAAAAGC CCGGTTCGCG
CTGTCGGGCG TCGCGGTCCT CGCGGCGTCA GCGAGCATCG CCGTCGCCGG GATCGTCGGC
TTCGTCGGGC TCATCGTCCC GCACATGGTG CGAAACCTCG TCGGCAGCGA CTCGAAGAAA
CTGATCGTCG GCTGTCTGTT CGTCGGGCCG GCACTGATGG TCAGCGCCGA CGTGGGCGCG
CGGCTGGCGT TGAGCCCGAC CCAGATTCCC GTCGGCATCG TCACCGGGCT CCTCGGCGGC
CCGTACTTCC TCTATCTGAT GCGAAAGCAG GAGAACATGG GCGAGATCTG A
 
Protein sequence
MSGEKSTVGT ERTASSRLPK SRVGWLLDPK LVTVVLTSVA IVFAGALIQI SYGAYSMTFL 
EAWRALFNPN VVFNPQAWDA FLLGEAMPEM SSESLIVWNI RLPRVFVAAL VGMNLGVSGA
IFQAVTRNEL ASPFILGVSS GAGLMILLTL VVFGSLTAFL PIIAAVGGAV AFLIVYVIAW
KNGTSPVRLV LAGVIVGTVF GSLQTGLFFF ADDIGVVQSA IAWTTGSLTG TDWEQVRLIL
PSTAVVVLFA VAGSRQMDVL LLGERTAQSL GMSIEKARFA LSGVAVLAAS ASIAVAGIVG
FVGLIVPHMV RNLVGSDSKK LIVGCLFVGP ALMVSADVGA RLALSPTQIP VGIVTGLLGG
PYFLYLMRKQ ENMGEI