Gene Htur_4248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_4248 
Symbol 
ID8744876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013744 
Strand
Start bp516872 
End bp518044 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content66% 
IMG OID646514793 
ProductABC transporter related protein 
Protein accessionYP_003405740 
Protein GI284167462 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATGCG ACGTGTACTC ACAGATATAC TCGAACGTCC TTCTCGCGAC CGACGGGAGC 
GAGTGTGCAC GCGCGGCGAC GACCCACGCG ATCGACCTCG CGGCGACGTA CGATGCGACG
CTGCACGCTC TACGTGATCG AAACGCGAAT CGGATACGAC AGCGACAGCG TCCATCCGGA
GACGATCGAA GACGACCGTA TAAGGCTCGA GGCGTCGTCG GTCGGCGCGT GCGCAGCATC
GAGTCACAGC CGATCGAACT CGAGTCCCTG ACGAAGTACT ACGGCGACAT TCGGGGCGTC
GAGGACCTCA CGTTCGCCGT CGACCGGGGC GAGATCTTTG GCTTCCTCGG CCCGAACGGC
GCGGGCAAGT CGACGGCCAT CCGCGTTCTC CTCGGACTGT TGAAGCCGAC CGACGGAACG
GCGTCGCTGC TGGGTCGGGA CGTGACGGAC CGAACGGAAC TACGCGACGC GAAGCGGCGC
CTCGGCTACC TCCCGAGCGA CGTCACCTTC TACGATCGCG TGACGGGCGC GGCGGTGCTC
GACCACTTCG GGCGGCTGCG CGGCGACGAG CGACGCGAGG AACTCCTCGA GCGCTTTCCG
GTTCCGCTCG ATCGGACCGT GAAGGCCTAC TCGAGCGGCA ACAGGCAGAA ACTCGCCATC
GTCGCGGCGT TCATGCACGA ACCCGACCTG GCGATCATGG ACGAGCCGAC GTCGGGACTC
GACCCGCTCG TCCAGAACGA GTTCTACGAA CTGCTCGAGG AGCGACGGGA CGCGGGCCGA
ACGAGTTTCT TCTCCTCGCA CATCCTGAGC GAGGTCCGGC GCGTCTGCGA CCGCGTCGGG
ATCATTCGGA ACGGCCGGCT GATCGAACTC GACACCGTCG AGAACATCCT CGCGGAAGGC
GGTACGGTCG CGACCGTTCG ATTGGCCGAG GAGCCGCCGC CAGCGGCCCT CGAGTTCCCG
GGGGTCGCGC GCGTCGACCG GCGGGACGGC GACGGCAGGT ACCGGCTCGT CCTCGCACGG
GAGTTCGACG CTCTCATCGA GCGCCTGAGC GAGTACACCG TCCTCGAACT CGAGGTTCGC
GAGGCGTCCA TCGAGGACGT GTTCATGCAC TTTTACGGAG GAACGGACGA GAACCCCGAT
TCGCCAGCGA GCGGGAACGG CGCGACACCC TAA
 
Protein sequence
MQCDVYSQIY SNVLLATDGS ECARAATTHA IDLAATYDAT LHALRDRNAN RIRQRQRPSG 
DDRRRPYKAR GVVGRRVRSI ESQPIELESL TKYYGDIRGV EDLTFAVDRG EIFGFLGPNG
AGKSTAIRVL LGLLKPTDGT ASLLGRDVTD RTELRDAKRR LGYLPSDVTF YDRVTGAAVL
DHFGRLRGDE RREELLERFP VPLDRTVKAY SSGNRQKLAI VAAFMHEPDL AIMDEPTSGL
DPLVQNEFYE LLEERRDAGR TSFFSSHILS EVRRVCDRVG IIRNGRLIEL DTVENILAEG
GTVATVRLAE EPPPAALEFP GVARVDRRDG DGRYRLVLAR EFDALIERLS EYTVLELEVR
EASIEDVFMH FYGGTDENPD SPASGNGATP