Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Htur_3883 |
Symbol | |
ID | 8744511 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haloterrigena turkmenica DSM 5511 |
Kingdom | Archaea |
Replicon accession | NC_013744 |
Strand | - |
Start bp | 114988 |
End bp | 116076 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 646514467 |
Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
Protein accession | YP_003405414 |
Protein GI | 284167136 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.128196 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGCCGT CCGAGCCGAT GCTCTCGATG GACAACGTCT CCGTCGAATT CACCGATGAC GGGGGTCTGC TCAACGTCTT CGGCGACTCG GAGACGGTCC GCGCGGTCAA CGACGTCTCC CTCGAGCTCG GCGAACAGGA GACGCTCACG CTGATCGGCG AGAGCGGCTG CGGGAAATCG ACGCTCGGGA AGACGGCGAT CGGCGCCCAG AAGCCGACCA GCGGAACGGT TAGCTATCGC GGCCAGGACA TCTGGGAGGC GCGAAACGAC TCCGCCAACG CCGAGATCCC GTTCGACGAG ATTCGTCACT CGCTCCAGAT CATCCACCAG GATCCCGGGA GCGCGCTCAA TCCGAACCAG CGGATCCTCA CCTCACTGAT GCTCCCGTTG AAGAAGTGGT ACCCCGATCT GGGCCGCGAG GAGCGAGAGG AGCGCATCCA CACGCTGTTC GAACGCGTCG GGATGTCGCC GCCGAGCGAT TACCTGAACC GGTACCCACA CCAGCTCTCG GGCGGGGAAA CCCAGCGCGC GGTGCTCGTT CGCGCGCTGT TGTTGAACCC CGATCTGATC CTGGCCGACG AGGCCATCTC GGCGCTGGAC GTCTCCCTGC GCGTCGAGAT GATGGATCTC ATGCTCGAGC TGCAGGACCT GTTCCAGACG TCGTACCTGT TCATCTCCCA CGACCTCTCG AACGCCCGCT ACATCGCCGA GAAGTCCGGC GGGCGGATCG CCGTGATGTA TCTCGGCGAG ATCGTCGAGA TCGGTACCGT CGATGAGATC GTCGAGAACC CACAACACCC TTACACGAAG GCGCTGCAGT GGGCGACGGC GAACCTCTAT GAGGACGAGG ACGACGAGGA GTTCCCCCTG CGGAAGATCG ACGTCCCCGA TCCGACGAAC CTTCCCTCCG GCTGCAGCTT CCACCCGCGC TGTCCGAACG CTCGAGAGGT GTGCAAACGC CAGCATCCGG GACGAATCCA CGCGGGCGGC GACGAGGAGA ACTACGCCCG GTGCTTCCGG GCGGACGAGC ACCACGAGTA CTGGAACAGC CCCGAGATAG CCGACGAGCC GCCGGTCGAC CCCCAGTGA
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Protein sequence | MAPSEPMLSM DNVSVEFTDD GGLLNVFGDS ETVRAVNDVS LELGEQETLT LIGESGCGKS TLGKTAIGAQ KPTSGTVSYR GQDIWEARND SANAEIPFDE IRHSLQIIHQ DPGSALNPNQ RILTSLMLPL KKWYPDLGRE EREERIHTLF ERVGMSPPSD YLNRYPHQLS GGETQRAVLV RALLLNPDLI LADEAISALD VSLRVEMMDL MLELQDLFQT SYLFISHDLS NARYIAEKSG GRIAVMYLGE IVEIGTVDEI VENPQHPYTK ALQWATANLY EDEDDEEFPL RKIDVPDPTN LPSGCSFHPR CPNAREVCKR QHPGRIHAGG DEENYARCFR ADEHHEYWNS PEIADEPPVD PQ
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