| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_3878 |
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| Symbol | |
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| ID | 8744506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haloterrigena turkmenica DSM 5511 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013744 |
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| Strand | - |
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| Start bp | 109795 |
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| End bp | 110631 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 646514462 |
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| Product | 5-carboxymethyl-2-hydroxymuconateDelta- isomerase |
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| Protein accession | YP_003405409 |
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| Protein GI | 284167131 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0575131 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATTCG TTCGATTCGC GACCGACGGC GGCGTCCGCT GGGGCGTTTC CGTCGATGAC
CGGACGTACG CGCTGGACCG CTTCGGAGCA CCGTCACTCG AGGACCTTGC GACGCCCGGC
TACCGTCGCC GCGTCCGTCG CGCCGTCGAG ACCGGGGAAC TCCCGGAAAT CGACGAGCCG
GAGACGTATC TGGTACCGAT TCCGTCCGTC GAGCAGATCG TCTGCGTCGG CCTGAACTAC
TACGACCACG CCGAAGAGCA AGACGAGGAG ATCCCCGACA CCCCGATGCT GTTCGCGAAA
TCGCCCTCGA GCGTCACCGG GCCCGACGCG CCGATCGTCC ACCCCGCGGA CGTCGAGCAG
GTCGACTACG AGGTCGAACT CGGCGTCGTC ATCGGTCGGA CCGCCTGCGA CGTCTCGGCC
GACGAGGCCG AGGAGTACGT CGCCGGCTAC ACGGTCGTCA ACGACGTCAG CGCGCGCGAC
GCCCAGTTCG AGGACGGCCA GTTCTTCCGG GGCAAGAGCT ACGACACGTT CGCGCCGATG
GGGCCGGCCC TGACCGCGCC CGACGCGATC GACGCCAACG ACGTCGACGT CGAACTCCGG
GTCAACGGCG AGGTGAAACA GGAGTCCTCG ACGGCGGAGT TCATCTTCGA CGTCGGCGAC
ACCATCGAGT TCCTCAGCCA CCGAATGACG CTGCAGCCGG GTACCGTCAT CTCGACCGGC
ACTCCGGGCG GCGTCGGCAT CTTCCGCGAT CCGCCGGAAC TGCTCTCGCC CGGAGACACG
GTCGAAGCCG AGGTCGAGGG GATCGGCACG CTCGAGAACC ACGTCGTCGA AGAGTAG
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| Protein sequence | MQFVRFATDG GVRWGVSVDD RTYALDRFGA PSLEDLATPG YRRRVRRAVE TGELPEIDEP
ETYLVPIPSV EQIVCVGLNY YDHAEEQDEE IPDTPMLFAK SPSSVTGPDA PIVHPADVEQ
VDYEVELGVV IGRTACDVSA DEAEEYVAGY TVVNDVSARD AQFEDGQFFR GKSYDTFAPM
GPALTAPDAI DANDVDVELR VNGEVKQESS TAEFIFDVGD TIEFLSHRMT LQPGTVISTG
TPGGVGIFRD PPELLSPGDT VEAEVEGIGT LENHVVEE
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