Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Htur_3860 |
Symbol | |
ID | 8744488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haloterrigena turkmenica DSM 5511 |
Kingdom | Archaea |
Replicon accession | NC_013744 |
Strand | + |
Start bp | 88594 |
End bp | 89910 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 646514445 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_003405392 |
Protein GI | 284167114 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00230775 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGCCG ATATCGCGTT CGACGTCGTC GTCGTCGGCT CCGGGCGCGC CGGGACGGCC GCGGCGTACA AGCTCGCCAA GGAAGGCGTC GACGTCGCGC TCGTCGAGCG AGCGAAGCAA CCGGGAATGA AGAACGTGAC CGGCGGCGTC CTCTACGGGG AGATCATGGA CGACCTCGTC CCAGAGTATC CCGAGGAGGC ACCGCTCGAG CGCCATGTCG TCGAGCACAA CATCAAGCTG CTCCACGGGG ACGCCGAGGT CGGGATCAGC TATCGGGATC AGGAGCTCCG CGAGGAGCCG AACTACACCC TTATGCTCGG CAAGTTCGAT CGCTGGTTCG TCGAGAAAGC CGAGGAGCGA GGGGCCGTCT TCGTCCCCGA GACGACGGTC ATCGACGTCA CGCAGACGGA CGACGGGGCC GTCGTCCACA CGGACCGCGA GGGCGGCGAC ATCGCGTGTC AGGCGGTGAT TGGCGCCGAC GGCGTCAACA CCACCGTCGG TCGGAAGACG GGCATCCAGC GCACGATGCA CAACCGGGAC ATGGCCCTGT CGGTTAAGAA GGTGATCCAG CTCGACCGCG AGACGATCAA CGAGCGGTTC AGCTTGGACG GCGACGAGGG CGCCGCCTAC GTTTACACCG GCTTCCCGGA AGGCGCGCCG ACCATCGGCT ACTTCATCTA CACGTTCGAG GACCGGATCT CCGTCGGCGC GGTCGGCAGC CTCGAGGTGC TGCGGCACCT CGGCGATGAA GGGTACGGCA AGACCGGGAC GCCGTTGTAC TCACTGCTCG AGCAGTTCAT GGAACTGGAC GCAGTCCGTC CCTACGTGGC GGGCGACGTC CTCGACGAGT ACCAGGGCAT TCTCGTCCCC GAATTCTCGT ACGATACGCT CCCTGACCGA TACGATCGGC GGGTCGCCCT CGTCGGGGAC GCCGCCGGCC TCGTCCTCAA CAAAGGGTAC ACCTTCCGCG GGCTCGACTA CGGCATTACC AGCGGGCTCG CGGCGGCGGC GTCGGCGCTG GAGTGTCGCG GCGACGGCGA CTGGACCGCC TTCGGCGAGC GCTACGATCG CCGCCTCGAG AACTCCTACG TCCTCAGGGA CATGAAACAG CACCGCCACC TCCCGGAGTT CCTCGAGAAC GAGCGCATGT ACGGCGCGTA CCCCGGCATG GCCGCCGAAA CGCTCCGGGG GATGTACTCC TCGAGCACCG ACGCCGAGGG ACTGACGTGG CGACAGGCCT GGAACGCGTT CCGCCGGAGC GACGCCACCG TTCGCGGGCT CCTATACGAC GGCTACCGGG CGTTCCGGTC GCTGTGA
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Protein sequence | MSADIAFDVV VVGSGRAGTA AAYKLAKEGV DVALVERAKQ PGMKNVTGGV LYGEIMDDLV PEYPEEAPLE RHVVEHNIKL LHGDAEVGIS YRDQELREEP NYTLMLGKFD RWFVEKAEER GAVFVPETTV IDVTQTDDGA VVHTDREGGD IACQAVIGAD GVNTTVGRKT GIQRTMHNRD MALSVKKVIQ LDRETINERF SLDGDEGAAY VYTGFPEGAP TIGYFIYTFE DRISVGAVGS LEVLRHLGDE GYGKTGTPLY SLLEQFMELD AVRPYVAGDV LDEYQGILVP EFSYDTLPDR YDRRVALVGD AAGLVLNKGY TFRGLDYGIT SGLAAAASAL ECRGDGDWTA FGERYDRRLE NSYVLRDMKQ HRHLPEFLEN ERMYGAYPGM AAETLRGMYS SSTDAEGLTW RQAWNAFRRS DATVRGLLYD GYRAFRSL
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