| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_3853 |
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| Symbol | |
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| ID | 8744481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haloterrigena turkmenica DSM 5511 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013744 |
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| Strand | - |
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| Start bp | 79452 |
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| End bp | 80276 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 646514438 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003405385 |
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| Protein GI | 284167107 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.102966 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAGAAT ACGACTTCAG CGACACGGTG GCGTTCGTCA CCGGCGCCGC GCACGGACAG
GGACGATCGC ACGCACAGTA TTACGCGAAA CACGGCGCCG ACGTCGTCGT CACCGATATC
GCCGGCGGAA TGGATTCGGT CCCCTACGAC CTCGGCACGG AGGACGAACT CGACGAGACG
GCCGGTCTCG TCGAAGATGA GGGCCAAGAG GCGCTGGCAC TTGGGGTAGA CGTCCGCGAC
GAGGACGACG TCCAGTCGGC CGTGGAGGAG GCGGTCGATC ACTTCGGTCA CATCGACGTT
CTCGCGAACA ACGCGGGGAT CGTGACGATA TCGGACATGG TCGAGATGGA CGAGCTGCTG
TGGGACGAGA TGATCGACAC CAACCTCAAG GGCGTCTGGC TCTGCGCGAA ACACGTCGGC
AAACACTTCG TCGATCGCGG CGACGGCGGG AAGATCGTCT CGACGTCCTC GACGGCCGGT
CTCGTCGGCA ATCCCGGCGC CGGACACTAT TCCGCGGCCA AACACGGCGT GATCGGACTG
ACGAAGACGC TGGTGCTCGA ACTTGCGGAG TACGACGTCA ACGTCAACGC CGTCTGTCCG
ACCGTCGTCG GCACGCCGAT GATCACCGGC ATGACCGAGG CCTACGGCGA GGAAGTGCTC
GAGGAAATTG GAGAGCTGGC CGGCCAGTTC AACGTGTTCG AGGACGAGGA TCCGGCGATC
GAATCGCGGG ACATCTCGGA AGCGTACATG TGGCTCTCGA GCGACGCCGC TCGCTACGTG
ACGGGCATCG CGCTCCCCGT CGACGCGGGA ATGACGTCGA AATAG
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| Protein sequence | MPEYDFSDTV AFVTGAAHGQ GRSHAQYYAK HGADVVVTDI AGGMDSVPYD LGTEDELDET
AGLVEDEGQE ALALGVDVRD EDDVQSAVEE AVDHFGHIDV LANNAGIVTI SDMVEMDELL
WDEMIDTNLK GVWLCAKHVG KHFVDRGDGG KIVSTSSTAG LVGNPGAGHY SAAKHGVIGL
TKTLVLELAE YDVNVNAVCP TVVGTPMITG MTEAYGEEVL EEIGELAGQF NVFEDEDPAI
ESRDISEAYM WLSSDAARYV TGIALPVDAG MTSK
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