Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Htur_3810 |
Symbol | |
ID | 8744438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haloterrigena turkmenica DSM 5511 |
Kingdom | Archaea |
Replicon accession | NC_013744 |
Strand | + |
Start bp | 32344 |
End bp | 33108 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 646514398 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003405345 |
Protein GI | 284167067 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTAG CTGAAGACAA ATCGACGGTT ATCACTGGCG CAGCATCCGG AATCGGGCGA GCAACTGCCA AGGTATTCGC CGAGCACGGA GCGAACGTCG TGGTTGCCGA CGTGGACGTC GACGGTGGCA ACGAGACGGT CGAAGCGATC GAAGACGACG GTGGCACGGC GACGTTCGTC GAGACCAACG TCGCCGACCA AGACGACGTA CAGAACATGA TCGATACTGC CGTCGAGGAA TACGGTGGCC TCGACGTGCT TTACAATAAC GCCGGCATCG ACGGCCCGCA CACGGAAATC GCCGAATACG ACGTAGACGG CTTCGACCAG GTCGTCGACG TCAATCTCAA AGGGGTCTTT CTCGGCATGA AATACGGTAT CAGCGCGATG CTCGAGGACG GCGGTGGATC AATCGTCAGT ACGTCGTCGA TCGGCGGTGT GAACGCTGTC GAAGGGTACA GCGGCTACGG GGCTACGAAG GCTGGCGTAA GTCTCATGAC CAAAACGGCA GCCGTCGAAT ACGCTGACCA AGGGATCCGG GCAAATGCCG TCGCACCGGG CCTCGTCAAC ACGCAGATGG TTCAGAACAT TATCGAAGAG GAGCCAGAGA TGGAAGAGGA GTTCCTCGCG TACGAACCGA TGGACGGCTT TTCCGACCCT CGAGAGATCG CGAACGCGGT CCTCTTTCTC ACGTCAGATC TCGCGTCCCG CGTTACTGGC GTAACGTTGC CGGTAGAGGG CGGGTTTTTG GCTAGCAATT CGTAG
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Protein sequence | MKLAEDKSTV ITGAASGIGR ATAKVFAEHG ANVVVADVDV DGGNETVEAI EDDGGTATFV ETNVADQDDV QNMIDTAVEE YGGLDVLYNN AGIDGPHTEI AEYDVDGFDQ VVDVNLKGVF LGMKYGISAM LEDGGGSIVS TSSIGGVNAV EGYSGYGATK AGVSLMTKTA AVEYADQGIR ANAVAPGLVN TQMVQNIIEE EPEMEEEFLA YEPMDGFSDP REIANAVLFL TSDLASRVTG VTLPVEGGFL ASNS
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