| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_3010 |
|---|
| Symbol | |
|---|
| ID | 8743628 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013743 |
|---|
| Strand | + |
|---|
| Start bp | 3093068 |
|---|
| End bp | 3094261 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 646513595 |
|---|
| Product | L-carnitine dehydratase/bile acid-inducible protein F |
|---|
| Protein accession | YP_003404551 |
|---|
| Protein GI | 284166272 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCTCG ATGGCATTCG TGTGCTCGAC TGCTCGCGGC TGCTGCCCGG CCCCTACGCG
ACGCAGTTGC TGGCCGACTG CGGCGCCGAG GTGGTGAAGG TAGAGGACAC CGACGCCGGC
GACTACGCTC GAGCGATGGA GCCGCACACG GCAGACGGCG TCGGCGCGAT TTTCGAGATG
GTCAACCGCG GCAAGCGCAG CGTCGCGATC GACCTGAAAA CCGACGGCGG ACGGGCGGCG
TTCTACCGGC TCGTCGAGGG CGCCGACGTC GTCCTCGAGG GATTCCGGCC GGGCGTGGTC
GATCGGCTGG GAATCGACTA CGAGACGCTC ACGGAGCACA ACGACGAGCT GATCTACTGC
TCGCTCACCG GCTACGGTCA GGACGGCCCG TGGGCGGATC GGGCCGGCCA CGACTTGAAC
TACGTCGCGC TGGCGGGCTT GCTCGATATG ACGCGGGAAT CGCCCGAGGA GAAACCGCAG
GTGCCCGGCT ACCCGATCGG CGACATGGCC GGCGGACTGT TCGCCGCGTT CGCTATCGTC
GGAGCGGTGC TCTCGAGGGA ACTCGGCAAC GCCGGCGGCG AGTACGTCGA CGTCGCGATG
GCCGACGTTG TCGCCTCGTT CGCCCAGCCG ATCGCCTATC AGGCCGCGAC CGGCGACCCC
GACGAGCCGC GACCCGGGGA GACACCGCTG ACGGGCGCCT ATCCGTGGTA CGACTGCTAC
GAGACCGCCG ACGGGAACTG GGTGACGCTC GCGGCCCTCG AGCCGGGGTT CTGGCGGGCG
TTCTGCGAGG CCGTCGATCG GGACGACCTC GCCGACGAGC ACGGCGCGGA GGATCCGGCC
GTTCGCGCCG CGCTCGAGGT CGAACTCCGG GATCTCTTCC GTGAACGGAC CCGTGACGAG
TGGGAGGCGG CCCTCGAGGG CGTCGACGCG GCGTTCGCCG GCGTCTACTC GCCCGCCGAG
ATGATTGAAC ACCCCCAGTT TCGGGCGCGA GATCTCATCG AGCGTCCGAA TGGCGCCCCG
CCGCGGATCG GATTTCCGGC CCGGTTCGGC GACGAAACCG CAGAGACGAC GGAGAGCGCG
GAACTCGACG AACGCGTCCC GACGCAGGGC GAACACACCC GCCGGTATCT CGCCGAGGCG
GGCTATAGCG ACGCGGAGAT CGACGCGCTC TACGACGCCG GCGCCGTCCG GTGA
|
|---|
| Protein sequence | MRLDGIRVLD CSRLLPGPYA TQLLADCGAE VVKVEDTDAG DYARAMEPHT ADGVGAIFEM
VNRGKRSVAI DLKTDGGRAA FYRLVEGADV VLEGFRPGVV DRLGIDYETL TEHNDELIYC
SLTGYGQDGP WADRAGHDLN YVALAGLLDM TRESPEEKPQ VPGYPIGDMA GGLFAAFAIV
GAVLSRELGN AGGEYVDVAM ADVVASFAQP IAYQAATGDP DEPRPGETPL TGAYPWYDCY
ETADGNWVTL AALEPGFWRA FCEAVDRDDL ADEHGAEDPA VRAALEVELR DLFRERTRDE
WEAALEGVDA AFAGVYSPAE MIEHPQFRAR DLIERPNGAP PRIGFPARFG DETAETTESA
ELDERVPTQG EHTRRYLAEA GYSDAEIDAL YDAGAVR
|
|---|
| |