Gene Htur_2007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_2007 
Symbol 
ID8742606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013743 
Strand
Start bp2078905 
End bp2080332 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content66% 
IMG OID646512589 
Productsodium:neurotransmitter symporter 
Protein accessionYP_003403564 
Protein GI284165285 
COG category[R] General function prediction only 
COG ID[COG0733] Na+-dependent transporters of the SNF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACGTG AGAGTTGGGC GAGTCGCGCC GGATTCATTC TGGCCGCGGT CGGAAGCGCA 
ATCGGATTGG GGAACATCTG GCGGTTCCCG TGGATGACCG CGGAGAACGG CGGAAGCGCC
TTTCTACTGT TGTATCTACT TATCGTCCTC GTCGTCGGAG TGCCGGGATT GCTGGCCGCG
TTCGTGATCG GTCGGCGGTC GAATCGGAAC CCGGTCGGGG CGTTCAAATC GCTCGCCGGA
TCGCGCTTCT GGACGGCGTT GGGCGCGCTC TGCGTCGTCA CCTCGATTCT GCTGATGTCG
TTCTACAGCG TCGTCGGAGG GTGGATCCTT CGGTACTTCC TCGAGAGCGC GACGGGCGCC
TATTTCGCGG CTCCCGAGAC CCACTTCGCG GCGATCAGCT ACGGTGCCGA AGCGTTCGGC
TACCAACTCG CCGTCCTCGC GGCCACGTCG TTGATCGTCG CCGCGGGGAT CAGACGCGGT
ATCGAGGCGA CGACGAAGGT GATGATGCCC GGCGTCGTCG TGTTGCTCAT CGGACTCGCG
ATCTGGGCGG CCCGACAGCC CGGCGCTGCC CAGGGATACG AGTTCTACCT CGGGTTCGAC
GGCGCCTACC TCGCTGAGAA CTTCCTCTCG GTGCTGGCGT CGGCCGCCGG CCAGGCGCTG
TTTACCCTCT CGATCGGCAG CGGAACGATG ATCACCTACG CCTCCTACGT CGACGACGAC
CGCTCGCTAC CCCTCGACGC CTCGGCCATC GCCGTATTCA ATCTCGGCAT CGGCATCCTG
GCCGGACTCG TGGTCTTCCC ACTGCTGTTC TCGTTCGCGC CGGGACCGAC CGAGGGCGGC
CCCGGCGCCC TGTTCGTCGG GATCGCCGGC GCGTTCGCGA ACCTACCCGG CGGGCGACTC
CTCGGCGCGG TCTTCTTCCT CGTCGTTCTC CTCGCAGCCT TAACGAGTCT GATCAGCATG
CTCGAGATCC CGGTCTCGTT TCTGGTCGAC GAGTTCGACC TCGAGCGGTC GACGGCGACC
TGGGGGCTAT TCGCGCTGGT CGCAGTTACC GGCGGCGTGA ACGCGTTCAG CCCCGCGGTG
TTCACGCTGT TCGCGGACCA ACTCGTCGAT CTCCTCTTGG TGCTCGGCCT GACCGGGTTC
ATGGTGTACA CGGCCTGGGT GCTCGGTCCG GCCGCGATCG AGGAGTACCT CGAAGGCGCG
GGACCGATCT CGAGCCCGCT GGTGATCCCG TGGCGGTACG CCATCGGGAC CGTCTTCCCG
GCGTTCCTCC TCTTTACGTT CTACGCCGAT GTCGCGGCCT TGACCGGGCT CTCAACGGGA
ACTGGGCCGT TGTTGGTCGC GACGCTGCTA ACGGTGCTAG TGCTCGTCTT CGTGGCCCGC
CGTTCCGTCT CCGAAAACCG ACCGGAACCG AGCGAGAGCG CGGACTGA
 
Protein sequence
MARESWASRA GFILAAVGSA IGLGNIWRFP WMTAENGGSA FLLLYLLIVL VVGVPGLLAA 
FVIGRRSNRN PVGAFKSLAG SRFWTALGAL CVVTSILLMS FYSVVGGWIL RYFLESATGA
YFAAPETHFA AISYGAEAFG YQLAVLAATS LIVAAGIRRG IEATTKVMMP GVVVLLIGLA
IWAARQPGAA QGYEFYLGFD GAYLAENFLS VLASAAGQAL FTLSIGSGTM ITYASYVDDD
RSLPLDASAI AVFNLGIGIL AGLVVFPLLF SFAPGPTEGG PGALFVGIAG AFANLPGGRL
LGAVFFLVVL LAALTSLISM LEIPVSFLVD EFDLERSTAT WGLFALVAVT GGVNAFSPAV
FTLFADQLVD LLLVLGLTGF MVYTAWVLGP AAIEEYLEGA GPISSPLVIP WRYAIGTVFP
AFLLFTFYAD VAALTGLSTG TGPLLVATLL TVLVLVFVAR RSVSENRPEP SESAD