Gene Htur_1839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_1839 
Symbol 
ID8742433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013743 
Strand+ 
Start bp1913781 
End bp1914734 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content69% 
IMG OID646512417 
Productprotein of unknown function DUF6 transmembrane 
Protein accessionYP_003403397 
Protein GI284165118 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTGT TCGATTCAGT GCCGAACGGG TACCGCGAAG CGGTGCTCTT TTCGATGCTC 
GCGCTCTGCT GGGGAACGTC GTTCGTGGCG ATCGAGATCG GACTCGAGCA CGTGCCGCCG 
CTGCTGTTCG CCGGGCTCCG CTACGCGGTT GCCGGCGTGA TCGTCTTCGG ATACGCGGCC 
GTCGTGACCG ATCGCACGCG GCCGCGAGGT CGGGCGGAGT GGCTGGCGGT GACCGTGGCC 
GGCGTCTTCG TCATCGCGCT CTATCACGGA CTGCTGTACC TCGGCGAACT GTACGTCTCG 
GGCGCGGTCG CGGCGACGCT CGTCAGTACG GCCCCAATCC TCACGGCGGC GTTTGCCGGC 
GTCGTCCTTC CGGAGGAACG GCTCTCGCTC GGCGGCGTCG TCGGCTTCGT CCTCGGACTG 
GTTGGCGTCA TCGCCGTGGT CCAGCCGTCG CCCGGGTCGC TCGGCGACGA CGTCACCGTC 
GGGGCCGCCC TGGTGTTCGC CTCGGCCGTC GCGTTCGCCC TCGGCAGCGT GTTCGTGCGA 
CCGATCGACT CGGAGCTCCC GCTCGAGACG CTTCAGGCCT GGGCGATGCT CGTCGGCGGC 
GCGGTGCTGT TGGGCTGGGC GGCCCTGCGG GGCGAATCGG TCGCGGCGAT CGATCCCACC 
CTGTCGGCGC TGGTCTCCTA CGGCTACCTG ACGGTCGTCT CCGGCGTGTT CGCGTTCCTC 
TGTTACTTCG AACTGCTCGA TCGAAGCGGG GCGACGCAGG TCAGTCTGGT CAGCTACGCG 
GAACCGGTCG TCGCGATGGG CGTCAGCTGG GTCGCCCTCG GCTACGTCGT CGACTCGGTG 
ATGCTCCTCG GGTTAGCGAC GATCCTCGCG GGCTTCGGCA TCGTCAAGCG CGGCGCGCTC 
CGGACGCTGT TGCGGTCGGC GCTCGAAACG CGCTCGACCG CGGCCTCGAA GTAG
 
Protein sequence
MKLFDSVPNG YREAVLFSML ALCWGTSFVA IEIGLEHVPP LLFAGLRYAV AGVIVFGYAA 
VVTDRTRPRG RAEWLAVTVA GVFVIALYHG LLYLGELYVS GAVAATLVST APILTAAFAG 
VVLPEERLSL GGVVGFVLGL VGVIAVVQPS PGSLGDDVTV GAALVFASAV AFALGSVFVR 
PIDSELPLET LQAWAMLVGG AVLLGWAALR GESVAAIDPT LSALVSYGYL TVVSGVFAFL 
CYFELLDRSG ATQVSLVSYA EPVVAMGVSW VALGYVVDSV MLLGLATILA GFGIVKRGAL 
RTLLRSALET RSTAASK