Gene Htur_0970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_0970 
Symbol 
ID8741555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013743 
Strand
Start bp995866 
End bp998055 
Gene Length2190 bp 
Protein Length729 aa 
Translation table11 
GC content66% 
IMG OID646511548 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_003402537 
Protein GI284164258 
COG category[T] Signal transduction mechanisms 
COG ID[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAGCGG TCGGCATAGG ACCGGTAGTG TCCCTCCAGA ACCGTGCCAT CTCCGCCGTC 
GGCGGGAGGC GCATTATCAT CGCTCTCGGT GCGCTGTATC TCGCACTGGC CGCGGGACGG
GGTCTCGCTC GAATCGTCGG CGGGAGACCG CTGGGAAACG TCCTCATCAT CACGCTTCTC
ATCGCCGGCC CCGGGCTCGT CCTCCTCTAC TGCGGATACC GGTTACCCAC GTTCGATATC
CGGAGCGAAT TTTACTCGTC CGTCGCGGAG TGGTGTCTCG GTGGCTTGGG CGTGATGCTC
GGCGTCCTCG TCGTCTACAG TCTCCAGCCC GGCGAGGCGG TTGACGATCC ATCGACGGCG
CTCATCCTGA CGGCGCTCGC CAGCGTCGCC GGCCTCGCGG CCGGCCTCCA CGATGCGGAA
GCCAAAACCC GGACGCGAGA GCTCGAACAG CGCAACCGAG AGCTAAAGCG GACGCAGTCG
CAGCTCGAGG AGACGGTGCA ACGACTCGAG GTGGCGAACA CCCAGCTCGC GGAATCGAAC
GACCGCCTCG AGCACTATCG AGCGTACACC GATCAGGTGC TGAACGCCAT CCACGACGTG
TTCTACGTCC TCGAGGAGGA CGGGTCGCTC CAGCGCTGGA ACGAGAGCCT CTGTGAGGTG
ACGGGCTACT CGGACGCGGA CGTCGCGTCG ATGAACGCCG TCGACTTCGT CGGCGACGAC
GACCGCGAGG CGGCCGCGAA CGCGATCAGG GACGGGTTCG AAACCGGGCG TCTGCAGTTC
GCGGCGGACC TGGTCACCGA GGACGGCGAG GCCATCCCCT ACGAGTTCGC CGCCTCGTCG
CTCGAGACGC CCGACGGCGA GTCGGTGCTG GCGGGCATCG GGCGCGATAT CTCCGAACGC
GAGGAGCGCG AGCGCGAACT CGAGCGGCGG GCCCGTCAGC AACAGGTCGT CGCCGACCTC
GGCCAGCTCG CCCTCGAGAC CGACGACCTC GACGAACTCA TGCGCGAAGT GGTTCGGCAA
GTAGCGGACG TGCTCGACAA CGAGTACTGC AAGGTGCTCG ACCTGGATCG GAAGCGCGAG
GAGCTCCTGC TCCGACAGGG CGTCGGGTGG CGGGACGGAA TCGTCGGCGA GGCGACGGTG
TCCGCCGTCG AATCCGACTC CCAGGCCGCC TACACCCTCT CGACCGACCG TCCGGTCGTC
GTCGAGGACC TCGAGACGGA AACGCGGTTC AGCGGGCCCG CATTGCTGAC GAACCACAAC
GTTCGCAGCG GTATCAGCAC CATTATCGGT CCGATCGACG AGCCGTGGGG CATCCTGGGG
ACGCACGACA CCGACGCCAA GACGTTCACC GACGAGGACG TCAACTTCGT CCAGAGCGTC
GCGAACGTGC TCGCCGAGGC GATCGAGCGC CGGCAGTATC AGGCGGAACT CGAGGAGTTG
ATCGCCGACC TTGAGGAGTC CAACGAGCGG CTGGAACAGT TCGCCTATGC GGCCTCCCAC
GACCTCCAGG AGCCGCTGCG AATGGTCTCG AGCTACCTGC GACTCATCGA CCGTCGGTAC
GGCGACGAAC TCGACGAGGA CGGCCACGAG TTCCTCGACT TCGCCGTCAA CGGGGCCGAC
CGGATGCGAG AGATGATCGA GGGGCTGCTC CAGTACTCGC GCGTCGAGAC GCGGGGCGAC
GAGTTCGCGC CGGTCGATCT CGAGACCGTT CTCGCGGACG TCCGCGAGAA CCTCACGGTG
AAAATCGAGG AGCGCGACGT CCGGATCACG ACCGAGTCGC TCCCGCGCGT TCGGGGCGAC
GAAGGGCAAC TGCGCCAGGT GTTCCAGAAC CTCGTTTCGA ACGCGATCGA GTACAGCGGT
GCGGAGCCAC CGCGAATACA CGTGTCCGCC GAACGGAACG GCGCGGAGTG GACGGTGTCC
GTCACCGACA ACGGGATCGG CATCGAACCG GCGGATCAGG AGCGCATCTT CGAGGTGTTC
CAGCGGCTTC ACGACCGCGA GGAGCATCCG GGTACCGGAA TCGGCCTCGC ACTGTGCGAG
CGAATCGTCG AACGCCACGG CGGGGAGATC TGGGTCGACT CCGAACCCGG CGACGGAGCG
ACCTTCTCGT TCACACTGCC GGCGATCGAG GCGGACTCCG ACCGGCCGTC GGAACTGGAG
TCGGGCGGCT GTTCCGTTCG CCGCGACTGA
 
Protein sequence
MVAVGIGPVV SLQNRAISAV GGRRIIIALG ALYLALAAGR GLARIVGGRP LGNVLIITLL 
IAGPGLVLLY CGYRLPTFDI RSEFYSSVAE WCLGGLGVML GVLVVYSLQP GEAVDDPSTA
LILTALASVA GLAAGLHDAE AKTRTRELEQ RNRELKRTQS QLEETVQRLE VANTQLAESN
DRLEHYRAYT DQVLNAIHDV FYVLEEDGSL QRWNESLCEV TGYSDADVAS MNAVDFVGDD
DREAAANAIR DGFETGRLQF AADLVTEDGE AIPYEFAASS LETPDGESVL AGIGRDISER
EERERELERR ARQQQVVADL GQLALETDDL DELMREVVRQ VADVLDNEYC KVLDLDRKRE
ELLLRQGVGW RDGIVGEATV SAVESDSQAA YTLSTDRPVV VEDLETETRF SGPALLTNHN
VRSGISTIIG PIDEPWGILG THDTDAKTFT DEDVNFVQSV ANVLAEAIER RQYQAELEEL
IADLEESNER LEQFAYAASH DLQEPLRMVS SYLRLIDRRY GDELDEDGHE FLDFAVNGAD
RMREMIEGLL QYSRVETRGD EFAPVDLETV LADVRENLTV KIEERDVRIT TESLPRVRGD
EGQLRQVFQN LVSNAIEYSG AEPPRIHVSA ERNGAEWTVS VTDNGIGIEP ADQERIFEVF
QRLHDREEHP GTGIGLALCE RIVERHGGEI WVDSEPGDGA TFSFTLPAIE ADSDRPSELE
SGGCSVRRD