| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_0657 |
|---|
| Symbol | |
|---|
| ID | 8741239 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013743 |
|---|
| Strand | + |
|---|
| Start bp | 683324 |
|---|
| End bp | 686482 |
|---|
| Gene Length | 3159 bp |
|---|
| Protein Length | 1052 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 646511235 |
|---|
| Product | multi-sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_003402227 |
|---|
| Protein GI | 284163948 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGATCTG AAACGGGGGT CGTCTACGTC TGTCCCGCCG CCGACGGGAC CGTCCGAGAA
CTGCGCGAAC GCGTCGGTCG AGTTACGACC GTCGACGCTA TCGCGGAGCG TCAGGCCGTT
CTCTCGAATG CCGACTGCGT CGTCGTCGGC GACGGCTCGC CCGACGCCGA TCCGGTCGAG
TGCTGTCGCC GGCTCCGGGA CCAGTGGTCC GACCTTCCCG TGATCGTCTT TCCGGCCGAC
GGCAGCGAGT CGCTGGCCGG CGCGGTCGTC GCCGCCGGCG CTGACGGCTA CGTTCCCCGC
GCCGACGGTG TCGACACGCT CGCGAGCCGT CTCGACGCGC TCCTCGCGGA CGACGGGACC
GAGACGCCGA CTGTCGACTC CTCCGCGTCC GATTCGGCGA CCGCGCTCTC GAGTCAACTC
GAGTCGCTGA TCGACCAATC GCCGTTCGCC ATGATCGAGT GGTCCCTCGA GTTCGACGCT
GTGAGCTGGA ATCCGGCGGC GACGGAGCTG TTCGGCTACA CGGCGTCAGA GGCCCACGGT
CGGGCCGCGA CCGAACTGAT CGTTCCCGCC GACATTCGGG ACGAGATCCG CAAGCACTGG
GAACACCTAC TCGACGGGGA GTTCGACGGA AACTCCGCGT GGCGGACCAA CGAGAACGTT
CGCAAGGACG GGTCGACGAT CACCTGCGAG TGGCTCAACA CGCCGCTGAC CGACGACGAC
GGCGCGGTCG TCAGCGTCCT CTCGTTCGTT CAGGACGTCA CCGCTGAACG CAAGCGCGCG
AACGCCCTCG AGGCGCTGCA GGGGACGACC CGCGAGCTGA TGCGCGCCGA GTCGGCCGAC
GAGATCGCGC GGATCGTCAC CGATGCGACC GACCACGTCA TCGACCGCCC CCTCGCGACG
GTCCGGTTCC ACGACGAGGA TCGCGAGACG CTCGAACCCG CCGCAGTCAG CGAGACGCTC
GACGAGGTCT CGGGCGAGAT CGCCGCTCTC GGGCCGGGCG ACGGGATACT CTGGCAGTCC
TACGAGGACG GCGAACCGGC TATCGTCGAA GACGCCTGGA CCGAGCGGCT CCCCTACGAT
GTCGGGGTCG ATGTCGGCAC GACCGTTTTC CAGCCGCTGG GTGACCACGG GGTGCTGACG
GTGGCATCGG TCGGCGACGC CGACCTCGAT CCCGCCGAAA TCCACCTCGT GCACGTCCTC
GCCGCGACGG CCGAAGCCGC GCTCGACCGC GCCGCCCGCG AACGGGAACT CGAGCGGACC
CAGACGATCG TCGAGACGGT CGGTGACTGC GTCTACCAGC TCGATGCCGA GGGCCGGTTC
GTCACCGTCA ACGACACGAT GGCGAAGACG TGTGACTACG GTCGCGACGC TCTCGTCGGC
GAGCACATCT CGACGGTCCT CACCGACGAG AGCGTCGAGC GCGGACAGCG CCACATTCGC
CGTCTCCGCT CGAACGATCG ACGTATTGCG ACCTACGAGG TCACGCTGGT GGGGCGCGAC
GGCGAACGCA CCCCGGCCGA GGTCAACATG GCCCTGTTGC GCTCGGACGG CGAGATCGTG
GGCTCGGCCG GCATCGCTCG CGATATCAGC GAACGCAAGC GGATGGAGCG AGAGCTGGTC
AAACGGAAGG CGAAGATCGA GCGTCTTCAC GAGATCGCCT CTCGCCTCGA GAACTGTCGG
AGTCGACAGG AGATCTACGA CTGCACCGTC GAGGCGGCCG AAGACGTCCT GAACTTCGAC
GTCTGCGTCG TCAAGCGTCT CGAGGGCGAA CACCTCGTCA CGGTGGCTCT CTCCTCGAAA
CTCGACGCCG AGTTCGACCG GCGGATGGGG ATCGACGAGG GGATCGCCAG CAAGACGTAT
CGAACAGGGG GGACCTACCG GATCGACGAC CTCCGGACGG CGCCCGACGC CGCGCCGGTC
GACGGCACGC TGCGCTCGGT GCTGTCCGTC CCGATCGGCG ACCGGGGCGT GTTTCAGACG
GTCTCGAAGA CGGTCGACTC GTTCAGTCGG GAGGACGAGG AGCTGGCGGA GCTCCTGTTG
TCACACGTCA CCGACGCGCT CGATCGACTC GCGTTCGAGG AGCAGTTGCG GGCGGAACGC
GACCGGTTCG CGGCACTGTT CGAGAACGTC CCCGACGCCG TCGTCAGCGC GCGCCAGACG
GCCGACGACG CGATCGTCGA GGCGGTCAAC CCGGCGTTCG AACGAACGTT CGGCTACGAG
GAGTCGGCGG TCGTCGATCA GTCCCTCGAT CAAATCATCG TCCCGCCCAA CAGGACCGCG
GAGGCGGAAA CGATCACCCG CCGCGGCGGC AACGGCGAGA CCGTCGAGAC CGAGGTCAAG
CGGCGGACCG CCGACGGATT GCGCGATTTC ATGATGCGCG TCGTTCCGGT CGACCGCGGC
GAGTCGACCG ACCACACGTT CGGCCTCTAC ACCGACGTCA CCGACCGGAA ACAACGGCAG
AAGCGCGTCG AGATCCTGAA CCGCGTCCTG CGCCACGACA TGCGAAACGG TATGAACATC
ATCGACGGCT GCGCCGAGAT GCTCGCCGAC GCCGTTGACG ACGACGATAT CGAGTACGCG
ACTACCATTC AGGAGCGGGC TAGCGAACTC GTCTCGCTCG CCGAGAAGAC CCGCACCGTC
GAGCGCGTCC TGGACCGCGA GCCGACGACG ACGGGGCCGA CCGACGTCGC CCAGACGATC
GCGGAAACCG TCGACCGCCT CGAGTCCGAC TATCCCGGCG TCACCGTCTC CCGTTCGGTC
CCCGACCGGC TGTTCGTCCG GATCGACGCC TCGCTGGAGA CGGCGCTCTA CCAGGTGCTC
GAGAACGCCG TCGAACACCA CGACGGGACG GCGCCGACGA TCGAGGTGTC GGTCTGCGAC
CGGAGCGACG ACGGAATGCT CTCGCTGTCG GTCGCCGACG ACGGGCCCGG AATGCCCGAC
GAGGAGCGGG AGCTACTCCA GGGCGACCGG GAGATCACGC AACTGCGCCA CGCCAGCGGG
CTCGGCCTCT GGCTCGTCAA CCTCGTCGTC ACGCAGGCCG GCGGCCAGCT GTCCTTCGAC
GCGAACGAGC CGCGAGGCAC CGTCGTCACG CTCGAGATTC CGCGCGCCGA CACGGAGTTG
GTGCAACCGA CCGGGGACGA GGCGGCTACC GGCGACTAA
|
|---|
| Protein sequence | MGSETGVVYV CPAADGTVRE LRERVGRVTT VDAIAERQAV LSNADCVVVG DGSPDADPVE
CCRRLRDQWS DLPVIVFPAD GSESLAGAVV AAGADGYVPR ADGVDTLASR LDALLADDGT
ETPTVDSSAS DSATALSSQL ESLIDQSPFA MIEWSLEFDA VSWNPAATEL FGYTASEAHG
RAATELIVPA DIRDEIRKHW EHLLDGEFDG NSAWRTNENV RKDGSTITCE WLNTPLTDDD
GAVVSVLSFV QDVTAERKRA NALEALQGTT RELMRAESAD EIARIVTDAT DHVIDRPLAT
VRFHDEDRET LEPAAVSETL DEVSGEIAAL GPGDGILWQS YEDGEPAIVE DAWTERLPYD
VGVDVGTTVF QPLGDHGVLT VASVGDADLD PAEIHLVHVL AATAEAALDR AARERELERT
QTIVETVGDC VYQLDAEGRF VTVNDTMAKT CDYGRDALVG EHISTVLTDE SVERGQRHIR
RLRSNDRRIA TYEVTLVGRD GERTPAEVNM ALLRSDGEIV GSAGIARDIS ERKRMERELV
KRKAKIERLH EIASRLENCR SRQEIYDCTV EAAEDVLNFD VCVVKRLEGE HLVTVALSSK
LDAEFDRRMG IDEGIASKTY RTGGTYRIDD LRTAPDAAPV DGTLRSVLSV PIGDRGVFQT
VSKTVDSFSR EDEELAELLL SHVTDALDRL AFEEQLRAER DRFAALFENV PDAVVSARQT
ADDAIVEAVN PAFERTFGYE ESAVVDQSLD QIIVPPNRTA EAETITRRGG NGETVETEVK
RRTADGLRDF MMRVVPVDRG ESTDHTFGLY TDVTDRKQRQ KRVEILNRVL RHDMRNGMNI
IDGCAEMLAD AVDDDDIEYA TTIQERASEL VSLAEKTRTV ERVLDREPTT TGPTDVAQTI
AETVDRLESD YPGVTVSRSV PDRLFVRIDA SLETALYQVL ENAVEHHDGT APTIEVSVCD
RSDDGMLSLS VADDGPGMPD EERELLQGDR EITQLRHASG LGLWLVNLVV TQAGGQLSFD
ANEPRGTVVT LEIPRADTEL VQPTGDEAAT GD
|
|---|
| |