Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Htur_0203 |
Symbol | |
ID | 8740766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haloterrigena turkmenica DSM 5511 |
Kingdom | Archaea |
Replicon accession | NC_013743 |
Strand | - |
Start bp | 221614 |
End bp | 222822 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 646510766 |
Product | NMD3 family protein |
Protein accession | YP_003401777 |
Protein GI | 284163498 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1499] NMD protein affecting ribosome stability and mRNA decay |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTGAGT CGCGTGCGTT CTGTCCCCGG TGTGGGGACC CCGTTCCTGA ACGGTCGGCG AGCGACGCAG ATGGCGAACC CGCGAACGAT CCCCTCCGCC CCGGCGCCGA GGTCGAACTC TGCGATTCGT GTTACTTCGA GGGCTTCGAC TTCGTGGACG CACCGGATCG GATCGACGTC CGGGTCTGTG CCCAGTGCGG CGCGGTCTAC CGCGGGAATC GGTGGGTCGA CGTCGGCGCG CAGGATTACA CCGACATCGC CATCGAGGAG GTCAGCGAGG CGCTGGCCGT CCACGTCGAC GTCGAGGACG TCGCCTGGCA GGTCGAGCCC GAACAGATCG ACGAGAACAC CATCCGGATG CACTGTTACT TCACGGGCGT GGTCCGCGGA ACGCCCGTCG AGGAGCAGGT GATGGTCCCC GTTAAGATCG CCCGCCAGAC TTGCCTGCGC TGTGGGCGGA TCGCCGGCGA CTACTACGCC AGCATCGTCC AGATCCGCGC CGAGGAGCGG ACGCCGACGA CCGACGAGAT GGACCGCGCG AAGGAGATCG CCAACACCGT CGTCGCCGAC ATGGAGGCGA CCGGCGACCG CAACGCCTTC GTCACCGAGA TGGGCGAGGT CGACGAGGGG CTGAACATCA AGGTCTCGAC CAACAAGATC GGCAAGAAGA TCTCGAACAA GATGGTCGAG GAGTTCGGCG GCACCGTCAA CGACGCCGAG ACGCTCGTGA CGGAGGACGA GGACGGCAAC GAGGTCTATC GAGTCACCTT CGCCGTCCGC CTTCCGCCGT ACACCCCCGG CGACGTCATC GAGCTCGCCG ACGACGACGG CGGCCCCGTG ATCGTCCGCA GCGCCCGCGG CAACCTCAAG GGCGTCCGCG CGACGACCGG CGAGCGCTAC GAGGCCAGTT ACGAGGAGGG CAACGCCCCC GACGCCCGGA AACTCGGCGA CCTCGAGGAC GCCGTCGAGG CTACGGTCGT CACCGTCGAG GACGAGAACG CCGTGCAGGT GCTCGATCCC GAGACCTACC GGGCGACGAC CGTCTCCCGG CCGGACTACT TCGATCCCGA GGCCGAGACG GTGCCCGTGC TGAAGAGCCG CGCCGGGCTA CACGTACTGC CCGATCCCGA CCCCGACACG GGCGACGAGG GGGAAGACGA ATCCGGACAC TACGATCCGT ACGCGAACCG CGACGAGGAC GATGCCTGA
|
Protein sequence | MSESRAFCPR CGDPVPERSA SDADGEPAND PLRPGAEVEL CDSCYFEGFD FVDAPDRIDV RVCAQCGAVY RGNRWVDVGA QDYTDIAIEE VSEALAVHVD VEDVAWQVEP EQIDENTIRM HCYFTGVVRG TPVEEQVMVP VKIARQTCLR CGRIAGDYYA SIVQIRAEER TPTTDEMDRA KEIANTVVAD MEATGDRNAF VTEMGEVDEG LNIKVSTNKI GKKISNKMVE EFGGTVNDAE TLVTEDEDGN EVYRVTFAVR LPPYTPGDVI ELADDDGGPV IVRSARGNLK GVRATTGERY EASYEEGNAP DARKLGDLED AVEATVVTVE DENAVQVLDP ETYRATTVSR PDYFDPEAET VPVLKSRAGL HVLPDPDPDT GDEGEDESGH YDPYANRDED DA
|
| |