Gene Htur_0003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_0003 
Symbol 
ID8740566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013743 
Strand- 
Start bp2975 
End bp3934 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content67% 
IMG OID646510566 
ProductSignal peptidase I-like protein 
Protein accessionYP_003401577 
Protein GI284163298 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0681] Signal peptidase I 
TIGRFAM ID[TIGR02228] signal peptidase I, archaeal type 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGGTT CTAGCCCCGG TGACGTCTCC GACGACCCCG ACGATACCCC CGATTCTAAC 
CGTCCCGACG ATCGGGAACG ATATCGCGGG GATCGAGACG CAGCCGCCGA CCCCAACTCG 
AGACGGGACG GCTCGGCCGC GGCGACGACG GCGTCCGACG ACGGCGTGAC GATCGAGGAC 
GACGGCGTCG TTCGCTGGTT TCTCCGATCC GACGACGAGA ACGTCCTCTT CGTCCGCGAC 
GTGCTCAGCA GCGTCGCGAT CGTCGCCGTC ATCGGCCTGA TACTGTTCGG CGTCAGCGGC 
GTCTGGCCGC CGCTGGTCGC CGTCGAAAGC CCCAGTATGA CCCCGAACAT GAAGACCGGT 
GATCTGATCT TCGTCGCCGA GGACGAGCGG TTCGTCGGCG ACGGCGCCGT CGCCGGCACC 
GGCGTGGTCA CCCTCGAGAG CGGACAGGAA AGCGGCTACG AGAAGTTCAA CAATCCCGGC 
GACGTGATCG TCTTCCAGCC CAACGGAAAC GAGCGGCGGA CGCCGATCAT CCATCGCGCC 
CACTTCAGGG TCGAAGAGGG CGAGAACTGG GTCGAGACCA AGGCCAACGA GGATATCGCT 
GGCGACATCA CCTGCGAGGA CATCACTACC TGTCCGGCAC CCCACGACGG GTTCGTCACG 
AAAGGTGATG CGAACAGCAA CTACGATCAG ATTGCAGGGG GCGCGACGAC GACCGTCGTC 
AAATCCGAGT GGGTCACCGG CAAAGCGATG TTCCGGGTCC CGTGGCTCGG CAACATCCGC 
CTGACCTTCG ACAAACTCCT CGGCGGTATC CTCGCCCCGT CGCCGGGGCC GGCCATCGAC 
GGCGCCTCGA GTCCCGCTAC TCCGGACGCA CCCGTCAGCC CGGCCGCTCT CGCCGGCGCG 
ACCGGTCTCG CGGCCTGCGG GGGCGGTGCC GTTACGGCTA TCGGTCGACG GCGGAACTGA
 
Protein sequence
MSGSSPGDVS DDPDDTPDSN RPDDRERYRG DRDAAADPNS RRDGSAAATT ASDDGVTIED 
DGVVRWFLRS DDENVLFVRD VLSSVAIVAV IGLILFGVSG VWPPLVAVES PSMTPNMKTG 
DLIFVAEDER FVGDGAVAGT GVVTLESGQE SGYEKFNNPG DVIVFQPNGN ERRTPIIHRA 
HFRVEEGENW VETKANEDIA GDITCEDITT CPAPHDGFVT KGDANSNYDQ IAGGATTTVV 
KSEWVTGKAM FRVPWLGNIR LTFDKLLGGI LAPSPGPAID GASSPATPDA PVSPAALAGA 
TGLAACGGGA VTAIGRRRN