Gene Hore_23410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_23410 
Symbol 
ID7314224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp2558667 
End bp2560106 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content44% 
IMG OID643612793 
Productglycine dehydrogenase subunit 2 
Protein accessionYP_002510081 
Protein GI220933173 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1003] Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0423957 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTGAAC CACTTATTAA AGATTACAGC AGTCAGGGCC GGAAGGGTTA TTCCCTGCCC 
GAACTTGATG TACCCGATAT AGATGTTAAA GAGTATTTAA AAGAGGGTTA TTATCGGGAA
GAGGCTCCGG ACCTTCCTGA AGTCAGTGAA GTAGATGTGG TCAGACATTA TACGGCCCTG
TCGGAAGAGA ATTATGGGGT TGATTCCGGT ATATATCCCT TAGGGTCCTG TACTATGAAG
TATAACCCCA AAATTAATGA AGAGATTGCC CGTCTTGATA AACTGGTGAA ACTTCATCCC
TACCAGGATG AAGATCAGAT TCAGGGGACC CTGGAAATCA TGTATGAATT AAAAGAGTAT
CTGGCAGAAA TCAGTGGAAT GGATGAGGTA ACCCTGCAAC CGGCTTCTGG AGCCCAGGGT
GAATTGACCG GGTTATTGAT TATTAAGAAG TATTTTGAGG AAAAAGGAGA AGAACGAACA
AAGGTAATTG TACCCGATTC TGCCCACGGT ACCAACCCCG CCAGTGCTGC GATGGCCGGT
TTTAAGGTTG TTGAAATTAA ATCAAACGAA CGGGGTATGG TTGACCTTGA AGCCCTTAAA
GAAGCAGTTG ATGAAAAAGT GGCAGCCCTG ATGCTTACCA ACCCCAATAC CCTGGGTATA
TTTGAAGAAG AAATCCTTGA TATTGCCAAA GTAGTCCATG ATGCCGGTGG CCTGCTTTAT
TACGATGGAG CCAATATGAA TGCTATTATG GGGTATGTCA GACCGGGTGA TATGAATTTC
GATGTTTTAC ACTTTAACCT TCATAAGACT TTTTCTACGC CCCATGGGGG TGGGGGTCCC
GGCTCCGGAC CGGTCGGTGT TAAAGAATTT TTAAAACCAT ATCTGCCCCG CCCTCTATTG
AAAAAAGATA ATGACCGGTA TTACTGGGAT TATGACCGTC CCTATTCTAT TGGTAAGGTT
CATAGTTTTT ATGGCAATTA TGCCGTGATG TTGCGAGCAT ATACCTATAT CAGGGCTCTG
GGAGGGAAAG GCCTGAAAGA GGTTACTGAA AATGCGGTGT TAAATGCCAA TTACCTCAAG
GTCAGATTAA AAGATATATA TGAACTTCCC TATGAAGAAA ATAGCCTTCA TGAATTTGTT
CTGTCGGGTA GCCGGCAGAA AAAGAAGGGG GTCAGTACCC TTAATATAGC CAAAAGGCTT
TTAGATTACG GACTGTATGC ACCAACCATA TATTTCCCGC TGATAGTTAA AGAAGCCTTA
ATGATTGAAC CTACTGAAAC CGAGAACCTG AAAACCCTGA ATCAATTTGT CGAAACTATG
AAGATTATTT CCCGGGAAAT AGAAGAAAGT CCTGAATTGG TGAAAGAGGC GCCCCGGAAT
ACCCCGGTCA GGAAACTGGA TGAGGCTCAG GCTGCCCGGA ACCCGGACCT GAGATGGTAG
 
Protein sequence
MIEPLIKDYS SQGRKGYSLP ELDVPDIDVK EYLKEGYYRE EAPDLPEVSE VDVVRHYTAL 
SEENYGVDSG IYPLGSCTMK YNPKINEEIA RLDKLVKLHP YQDEDQIQGT LEIMYELKEY
LAEISGMDEV TLQPASGAQG ELTGLLIIKK YFEEKGEERT KVIVPDSAHG TNPASAAMAG
FKVVEIKSNE RGMVDLEALK EAVDEKVAAL MLTNPNTLGI FEEEILDIAK VVHDAGGLLY
YDGANMNAIM GYVRPGDMNF DVLHFNLHKT FSTPHGGGGP GSGPVGVKEF LKPYLPRPLL
KKDNDRYYWD YDRPYSIGKV HSFYGNYAVM LRAYTYIRAL GGKGLKEVTE NAVLNANYLK
VRLKDIYELP YEENSLHEFV LSGSRQKKKG VSTLNIAKRL LDYGLYAPTI YFPLIVKEAL
MIEPTETENL KTLNQFVETM KIISREIEES PELVKEAPRN TPVRKLDEAQ AARNPDLRW