Gene Hore_22610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_22610 
Symbol 
ID7313013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp2465192 
End bp2467291 
Gene Length2100 bp 
Protein Length699 aa 
Translation table11 
GC content39% 
IMG OID643612713 
ProductCheA signal transduction histidine kinase 
Protein accessionYP_002510001 
Protein GI220933093 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0643] Chemotaxis protein histidine kinase and related kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones61 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGAAG GAGACCTGCT TAATACCTTT ATTGAAGAGG CAAAGGAATT ACTGGATAAG 
ATGGTAGTAG ACCTGCTTGA GCTGGAGGCA AAACCAGGTG ATATGGATTT GATTAATAAC
ATTTTCAGGG GGATGCATAC TCTGAAAGGA AGTGCCAGTC TAACAGGCCT TAACGATATT
GCTAATTTTG TTCATCATTC TGAGGATTTA CTGGACCAGG TCAGAAGAGG ATGTATTACA
GTAAATGATA AGGTTATTAA TTTATTACTC ACATGTACTG ACCTGATTGG AGAAATGGTT
GAAGCGCTAG GTAATGATGA TGTGCAGGTT AAAAATGAGA AAGTTGAGTC TATTATATGG
GAAATTAAAA AGTTGTTGAA GGATCAAACA GAACATACTC CTTCTGAGGA AGGAAGTCTT
GGAGATAATC TACATAATTT TGGTACAGGG GAAAGATGTT ACCGTATTAA ACTCGATTTC
AATCCCAATT TATTTGAAAC AGGTACAGAC CCCTTGATGC TTGTCAGGGA ACTAAGGGAA
TTTAGTGACA TATTGATGGT GGCAGTCAAT TATACCAGGG TACCTGACTT ATACAACCTT
GATCCTGAAT TATGTTATCT TACATTAACT ATCTTAATTA AAACCGGGGT AGGAATTGAT
AGGATAAAGG ATGTCTTTAT TTTTGTTCAG GTTGATAATA AGGTAGAAAT TGAAGATATC
ACAGAAAATT TCTCTGACAA TATTGACATT TCCCTGTCAG ATAAAAAGAC AGGTGAAATA
CTGGTTGAGA GAGGGATTGT TGAAGAAGAA GATATCACAC AGGCCCTTGC AAGGCAAAAA
AAGATTGGAG AAATATTAAC TGAGGAAGGA AAGGTAAGCA GGGAACAGGT TCAGAGGGTT
GTTTATGACC AGCACAAAAG TCGGGCGGTA AAGGAAAAGA GTACTATTAA GGTAGATACG
CATAAACTGG AGTCCCTAAT GAATTCTATG GCTGAACTGG TAATTGCCCA GGCCAAGGTC
AGGGAATTAG TTATTCATAG AACCGACAGG TCTGAAAATG AGATAATGAC TGCCTTAAAT
TCGGTTGATA AAAGGATACG TAACCTGCAG GAAGATATTA TGAAAGTAAG AATGGTTCCC
ATTGGTAATA CATTTCTTAG GTTCAAAAGG CTGGTCAGGG ACCTATCACG AGAACAGGGA
AAAGAAATCA ATCTGGAAAT AAGGGGTAAA GAGACTGAAC TGGATAAAAT TGTTATTGAA
CGAATCTATG ATCCTTTAAA ACACATGATC AGGAATTCAG TTGACCACGG AATAGAACCA
CCTGAAGAAA GAGAAGCATT GGGAAAAAAC AGGGTTGGTA CGATATCATT GAATTCTTAT
CATCAGGAAG GGAATATCAT CATTGAGGTT GCCGATGACG GTAGGGGTCT GGATAAAGAG
AAAATACTGG ATAAAGCTAT CAACCGGGGG GTAGTCGATG AAGACCAGGA ACTGACAGAA
CAGGGAATCT ACCGGCTAAT ATTCGAACCA GGTCTTTCCA CAAGTGAAGA AGTTACAGAG
ACTTCAGGAC GCGGGGTAGG AATGGATGTA GTCAGGAATA ATATTGAACA GCTTAGAGGT
ACTATTAATA TATTTAGCAA CCCGGGCGAA GGGACAAGGT TTAAAATAAA ACTCCCGCTG
ACACTGGCAA TAATTGATGG AATGAATGTT AAAGTCGGAG ATGAACAGTT TATTATACCG
TTGAATTCTA TAGTTGAGTT TATCAGGCCA CTACCTGAGC ATATAAAAAC AGTTAATGGC
AAGGGAGAGG TAGTTAAAGT CAGGGACGAA TATATAACTT TGAGCAGGCT CTATAAATTG
TTTAATTTAA AGGGCAGTAA AACTGACCCA ACCGAGGGTA TACTGGTTAT CTTACAGGAT
GAAAACCGCA AACTCTGTTT GCTGGTCGAT GAAATTGTTG GCCAGCAACA GGCAGTGGTG
AAAAGTATGG AAGATAATTA TACATTTATT GACGGAATTG CAGGAGCAAC TATTATGGGT
GACGGCAGGG TTGCCATGAT ACTGGATGTA TCTACTATTA TCAGGATGGC TGTTAATTAA
 
Protein sequence
MTEGDLLNTF IEEAKELLDK MVVDLLELEA KPGDMDLINN IFRGMHTLKG SASLTGLNDI 
ANFVHHSEDL LDQVRRGCIT VNDKVINLLL TCTDLIGEMV EALGNDDVQV KNEKVESIIW
EIKKLLKDQT EHTPSEEGSL GDNLHNFGTG ERCYRIKLDF NPNLFETGTD PLMLVRELRE
FSDILMVAVN YTRVPDLYNL DPELCYLTLT ILIKTGVGID RIKDVFIFVQ VDNKVEIEDI
TENFSDNIDI SLSDKKTGEI LVERGIVEEE DITQALARQK KIGEILTEEG KVSREQVQRV
VYDQHKSRAV KEKSTIKVDT HKLESLMNSM AELVIAQAKV RELVIHRTDR SENEIMTALN
SVDKRIRNLQ EDIMKVRMVP IGNTFLRFKR LVRDLSREQG KEINLEIRGK ETELDKIVIE
RIYDPLKHMI RNSVDHGIEP PEEREALGKN RVGTISLNSY HQEGNIIIEV ADDGRGLDKE
KILDKAINRG VVDEDQELTE QGIYRLIFEP GLSTSEEVTE TSGRGVGMDV VRNNIEQLRG
TINIFSNPGE GTRFKIKLPL TLAIIDGMNV KVGDEQFIIP LNSIVEFIRP LPEHIKTVNG
KGEVVKVRDE YITLSRLYKL FNLKGSKTDP TEGILVILQD ENRKLCLLVD EIVGQQQAVV
KSMEDNYTFI DGIAGATIMG DGRVAMILDV STIIRMAVN